Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1060

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1059: 9427 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 300871 to 301562 9427 mRNA_1060: 9428 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 301806 to 307768 9428 mRNA_1061: 9429 - BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-..., at 308503 to 311284 9429

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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300,955 - 9427 mRNA_1059 0.12 0.2
300,969 - 9427 mRNA_1059 0.14 0.2
300,971 + 9427 mRNA_1059 0.14 1.0
301,129 - 9427 mRNA_1059 0.37 -0.9
301,132 + 9427 mRNA_1059 0.38 -3.6
301,542 + -0.1
301,545 - -0.7
301,559 - 1.2
301,566 + -0.0
301,566 + 1.2
301,566 + -0.2
301,574 + -2.7
301,582 + -2.8
301,582 + -1.9
301,582 + -0.5
301,582 + -0.3
301,585 + 0.6
301,587 + -0.8
301,589 - -1.8
301,737 - -1.3
301,821 - 0.1
302,015 + -0.2
302,097 - -0.5
302,146 - 0.6
302,152 + 0.1
302,221 - 0.2
302,479 + 9428 mRNA_1060 0.11 -0.7
302,506 - 9428 mRNA_1060 0.12 -2.9
302,510 + 9428 mRNA_1060 0.12 0.1
302,554 + 9428 mRNA_1060 0.13 0.7
302,604 - 9428 mRNA_1060 0.13 -0.6
302,621 + 9428 mRNA_1060 0.14 -1.7
302,718 + 9428 mRNA_1060 0.15 0.1
302,765 - 9428 mRNA_1060 0.16 0.1
302,773 + 9428 mRNA_1060 0.16 -2.2
303,025 - 9428 mRNA_1060 0.20 0.1
303,039 + 9428 mRNA_1060 0.21 -0.3
303,056 + 9428 mRNA_1060 0.21 -1.1
303,190 - 9428 mRNA_1060 0.23 -0.1
303,196 - 9428 mRNA_1060 0.23 -0.0
303,260 + 9428 mRNA_1060 0.24 -0.4
303,416 + 9428 mRNA_1060 0.27 0.7
303,458 + 9428 mRNA_1060 0.28 -0.4
303,626 - 9428 mRNA_1060 0.31 -0.3
303,663 - 9428 mRNA_1060 0.31 -0.9
303,663 - 9428 mRNA_1060 0.31 -2.5
303,663 - 9428 mRNA_1060 0.31 0.4
303,663 - 9428 mRNA_1060 0.31 -0.1
303,663 - 9428 mRNA_1060 0.31 -0.9
303,663 - 9428 mRNA_1060 0.31 -0.5
303,669 + 9428 mRNA_1060 0.31 -0.6
303,669 + 9428 mRNA_1060 0.31 -0.0
303,669 + 9428 mRNA_1060 0.31 -0.2
303,669 + 9428 mRNA_1060 0.31 -0.5
303,768 - 9428 mRNA_1060 0.33 0.4
303,795 - 9428 mRNA_1060 0.33 0.1
303,859 + 9428 mRNA_1060 0.34 -1.3
303,900 - 9428 mRNA_1060 0.35 -3.2
303,985 + 9428 mRNA_1060 0.37 0.7
304,171 + 9428 mRNA_1060 0.40 -0.4
304,174 - 9428 mRNA_1060 0.40 0.5
304,289 + 9428 mRNA_1060 0.42 1.6
304,373 + 9428 mRNA_1060 0.43 -1.1
304,651 - 9428 mRNA_1060 0.48 -0.8
304,854 - 9428 mRNA_1060 0.51 -1.0
304,971 + 9428 mRNA_1060 0.53 -1.1
305,009 + 9428 mRNA_1060 0.54 -1.6
305,110 - 9428 mRNA_1060 0.55 -0.1
305,119 - 9428 mRNA_1060 0.56 -1.8
305,141 - 9428 mRNA_1060 0.56 -0.7
305,351 + 9428 mRNA_1060 0.59 -2.9
305,357 - 9428 mRNA_1060 0.60 0.5
305,391 - 9428 mRNA_1060 0.60 1.4
305,394 - 9428 mRNA_1060 0.60 -1.5
305,603 - 9428 mRNA_1060 0.64 -3.2
305,819 + 9428 mRNA_1060 0.67 -3.6
306,013 + 9428 mRNA_1060 0.71 -0.1
306,152 - 9428 mRNA_1060 0.73 1.0
306,193 - 9428 mRNA_1060 0.74 -0.2
306,248 + 9428 mRNA_1060 0.74 0.1
306,673 + 9428 mRNA_1060 0.82 0.3
306,834 - 9428 mRNA_1060 0.84 0.1
307,274 - 1.3
307,284 + -0.1
307,322 - -0.5
307,550 - -2.4
307,837 - -0.7
307,850 + -0.4
307,861 - -2.9
307,965 - -1.3
308,021 - -0.8
308,152 - 1.9
308,283 + 1.2
308,334 + -2.2
308,619 - 0.5