Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1024

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203 9391 mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230632 to 231986 9392 mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232781 to 233762 9393

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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230,212 - 0.5
230,354 + 0.5
230,464 - 0.4
230,495 - -2.0
230,510 - -0.0
230,890 + 9392 mRNA_1024 0.19 -1.3
230,901 + 9392 mRNA_1024 0.20 0.2
231,023 - 9392 mRNA_1024 0.29 -2.9
231,044 - 9392 mRNA_1024 0.30 -0.5
231,064 + 9392 mRNA_1024 0.32 -1.7
231,445 - 9392 mRNA_1024 0.60 0.6
231,807 - 9392 mRNA_1024 0.87 -0.9
231,868 + -1.2
231,910 + -2.6
232,090 - 0.4
232,144 + 0.0
232,435 - 0.1
232,447 + -2.9
232,472 - -1.4
232,474 - -1.3
232,502 - 0.8
232,616 - -2.4
232,642 + -1.9
232,779 - -1.8
232,822 + 0.7