Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_971

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_971: 9339 - KOG2262 Sexual differentiation process protein ISP4, at 104337 to 107412 9339 mRNA_972: 9340 - Hypothetical Protein, at 107840 to 108806 9340

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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103,931 + 0.0
104,023 - 0.7
104,064 - -0.5
104,075 - 0.1
104,076 + 0.7
104,080 + 0.1
104,089 + -0.0
104,090 + -0.0
104,093 - -1.0
104,098 - -0.4
104,111 - -1.0
104,119 + 1.1
104,126 + 1.3
104,185 + -0.2
104,239 + -0.2
104,254 - 0.1
104,271 + -0.7
104,284 - -0.6
104,307 + 0.7
104,335 - -0.4
104,373 + -0.1
104,373 + -0.1
104,376 - -0.5
104,380 + 0.6
104,382 + -0.0
104,386 + 0.4
104,416 + 2.2
104,433 - 0.0
104,442 + 2.6
104,445 + -1.0
104,487 + 0.7
104,546 - 0.6
104,696 + 9339 mRNA_971 0.12 -0.3
104,833 + 9339 mRNA_971 0.16 0.7
104,834 + 9339 mRNA_971 0.16 0.4
104,837 - 9339 mRNA_971 0.16 0.3
104,856 + 9339 mRNA_971 0.17 0.6
104,860 + 9339 mRNA_971 0.17 -0.2
104,925 - 9339 mRNA_971 0.19 0.2
104,979 + 9339 mRNA_971 0.21 0.8
105,012 + 9339 mRNA_971 0.22 0.3
105,062 + 9339 mRNA_971 0.24 1.0
105,096 - 9339 mRNA_971 0.25 -0.0
105,129 - 9339 mRNA_971 0.26 0.6
105,517 - 9339 mRNA_971 0.38 -0.3
105,580 + 9339 mRNA_971 0.40 -1.3
105,584 + 9339 mRNA_971 0.41 0.1
105,611 + 9339 mRNA_971 0.41 -0.2
105,638 - 9339 mRNA_971 0.42 -0.1
105,705 - 9339 mRNA_971 0.44 2.0
105,713 + 9339 mRNA_971 0.45 0.7
105,762 + 9339 mRNA_971 0.46 -0.3
106,020 - 9339 mRNA_971 0.55 0.7
106,238 - 9339 mRNA_971 0.62 0.8
106,267 + 9339 mRNA_971 0.63 -0.7
106,281 + 9339 mRNA_971 0.63 -0.3
106,303 + 9339 mRNA_971 0.64 -0.8
106,545 + 9339 mRNA_971 0.72 0.2
106,567 + 9339 mRNA_971 0.72 0.9
106,578 - 9339 mRNA_971 0.73 -2.9
106,637 - 9339 mRNA_971 0.75 0.3
106,754 - 9339 mRNA_971 0.79 1.1
106,770 - 9339 mRNA_971 0.79 0.4
106,892 + 9339 mRNA_971 0.83 -0.7
107,017 + 9339 mRNA_971 0.87 -0.5
107,023 - 9339 mRNA_971 0.87 -0.1
107,031 + 9339 mRNA_971 0.88 0.3
107,040 + 9339 mRNA_971 0.88 1.4
107,122 + -2.9
107,184 - 0.3
107,213 + 0.5
107,218 - -0.2
107,233 + 1.1
107,266 + 1.6
107,327 - 1.0
107,340 - 0.9
107,345 + 1.6
107,352 + 1.2
107,363 - -0.1
107,370 + 0.1
107,430 + -0.2
107,461 - -1.4
107,464 - 0.6
107,471 + -3.5
107,483 - 1.1
107,488 - 1.4
107,490 + -1.5
107,491 - 0.9
107,499 - -1.3
107,499 - 0.7
107,499 - 0.2
107,500 + 0.6
107,508 - 2.2
107,509 + 0.5
107,515 + -2.0
107,515 - -0.4
107,519 - 0.8
107,522 - -0.1
107,523 + 0.0
107,524 + 0.6
107,526 + -0.2
107,535 + -2.7
107,537 + 0.2
107,540 - 1.9
107,548 + -0.3
107,548 - 1.6
107,554 + -0.5
107,559 - 0.7
107,560 + 1.1
107,560 - -0.4
107,567 + 0.9
107,571 - -0.4
107,576 - 1.6
107,577 + 1.0
107,581 - 1.0
107,585 - 1.3
107,585 - 0.3
107,585 + 0.3
107,585 + 0.6
107,586 + 1.8
107,640 + -0.1
107,645 - -1.4
107,653 + -0.4
107,674 - 0.6
107,683 - 1.4
107,687 - 0.5
107,690 - -0.2
107,691 + -0.3
107,693 - 0.5
107,693 - -0.1
107,698 + -0.3
107,700 - 0.3
107,712 + -3.8
107,713 - 0.8
107,714 - 1.0
107,717 - -0.2
107,719 - 1.0
107,720 - -0.4
107,721 - 1.6
107,729 + 0.1
107,730 - 0.0
107,731 + 0.4
107,738 + 1.5
107,739 + -2.7
107,739 + 2.0
107,756 - -0.7
107,763 + 0.1
107,799 + 1.5
107,804 + -0.5
107,804 - 0.5
107,808 + 1.3
107,816 - 0.2
107,838 - 0.4
107,838 - -2.1
107,853 + 2.1
107,865 + -0.2
107,866 + 0.5
107,866 + 0.2
107,882 - -1.2
107,883 - -0.2
107,891 - 0.9
107,895 - 0.1
107,896 + 0.2
107,897 - 1.0
107,898 + -1.1
107,898 + 0.3
107,907 - -0.2
107,909 - 0.9
107,909 - -0.1
107,910 + -0.4
107,910 + -1.3
107,913 + -0.1
107,914 - 1.8
107,914 - -2.5
107,921 + 0.5
107,923 - -0.4
107,928 + 0.2
107,929 - -0.7
107,933 - 0.1
107,943 + 9340 mRNA_972 0.11 -0.3
107,948 - 9340 mRNA_972 0.11 0.5
107,951 - 9340 mRNA_972 0.11 -1.6
107,954 + 9340 mRNA_972 0.12 1.2
107,958 - 9340 mRNA_972 0.12 -0.2
107,962 + 9340 mRNA_972 0.13 0.3
107,966 + 9340 mRNA_972 0.13 0.4
107,978 + 9340 mRNA_972 0.14 -0.2
107,980 - 9340 mRNA_972 0.14 -1.0
108,046 + 9340 mRNA_972 0.21 -0.4
108,065 + 9340 mRNA_972 0.23 -0.1
108,071 - 9340 mRNA_972 0.24 0.4
108,084 + 9340 mRNA_972 0.25 -0.7
108,089 + 9340 mRNA_972 0.26 1.0
108,099 - 9340 mRNA_972 0.27 1.2
108,114 + 9340 mRNA_972 0.28 0.7
108,117 - 9340 mRNA_972 0.29 1.2
108,127 - 9340 mRNA_972 0.30 -0.2
108,128 - 9340 mRNA_972 0.30 -0.0
108,131 + 9340 mRNA_972 0.30 0.3
108,131 + 9340 mRNA_972 0.30 -0.8
108,139 - 9340 mRNA_972 0.31 0.6
108,145 + 9340 mRNA_972 0.32 0.1
108,147 - 9340 mRNA_972 0.32 0.2
108,166 + 9340 mRNA_972 0.34 -1.8
108,169 + 9340 mRNA_972 0.34 -0.5
108,192 - 9340 mRNA_972 0.36 0.2
108,197 + 9340 mRNA_972 0.37 0.1
108,215 + 9340 mRNA_972 0.39 0.1
108,220 + 9340 mRNA_972 0.39 -0.2
108,228 - 9340 mRNA_972 0.40 1.1
108,231 - 9340 mRNA_972 0.40 -1.3
108,233 - 9340 mRNA_972 0.41 0.5
108,233 + 9340 mRNA_972 0.41 1.6
108,234 - 9340 mRNA_972 0.41 -0.9
108,247 - 9340 mRNA_972 0.42 -1.1
108,248 + 9340 mRNA_972 0.42 -1.5
108,250 + 9340 mRNA_972 0.42 0.6
108,252 - 9340 mRNA_972 0.43 -1.5
108,254 + 9340 mRNA_972 0.43 -0.1
108,257 - 9340 mRNA_972 0.43 0.2
108,259 + 9340 mRNA_972 0.43 0.6
108,261 - 9340 mRNA_972 0.44 1.0
108,265 - 9340 mRNA_972 0.44 0.5
108,266 + 9340 mRNA_972 0.44 -0.4
108,270 - 9340 mRNA_972 0.44 1.7
108,270 - 9340 mRNA_972 0.44 1.7
108,271 + 9340 mRNA_972 0.45 0.8
108,271 + 9340 mRNA_972 0.45 0.2
108,273 - 9340 mRNA_972 0.45 -0.6
108,286 - 9340 mRNA_972 0.46 0.3
108,293 - 9340 mRNA_972 0.47 -0.6
108,297 - 9340 mRNA_972 0.47 0.3
108,298 - 9340 mRNA_972 0.47 0.6
108,298 + 9340 mRNA_972 0.47 0.0
108,298 + 9340 mRNA_972 0.47 0.8
108,304 - 9340 mRNA_972 0.48 -0.1
108,314 - 9340 mRNA_972 0.49 2.8
108,328 + 9340 mRNA_972 0.50 0.8
108,338 + 9340 mRNA_972 0.51 0.1
108,357 + 9340 mRNA_972 0.53 0.6
108,378 + 9340 mRNA_972 0.56 0.2
108,378 - 9340 mRNA_972 0.56 -2.5
108,390 + 9340 mRNA_972 0.57 2.1
108,398 - 9340 mRNA_972 0.58 0.5
108,399 - 9340 mRNA_972 0.58 1.0
108,400 - 9340 mRNA_972 0.58 -2.2
108,409 + 9340 mRNA_972 0.59 0.4