Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_797

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1893932 to 1897116 9164 mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1897731 to 1898518 9165 mRNA_798: 9166 - K15376 GPHN gephyrin, at 1898956 to 1901377 9166

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,896,830 - -0.1
1,897,130 - 0.4
1,897,132 + -0.3
1,897,160 + -0.9
1,897,265 - -0.8
1,897,292 - -0.0
1,897,404 + -1.6
1,897,405 - -1.2
1,897,416 + -0.7
1,897,427 + 0.5
1,897,432 + -1.3
1,897,436 + -0.2
1,897,437 - 0.6
1,897,445 - 0.5
1,897,448 - 0.4
1,897,465 + -2.8
1,897,495 - 0.9
1,897,588 + -2.1
1,897,596 + -0.1
1,898,347 - 9165 mRNA_797 0.78 -2.3
1,898,360 - 9165 mRNA_797 0.80 1.0
1,899,044 + -0.0
1,899,261 + 9166 mRNA_798 0.13 0.5
1,899,265 - 9166 mRNA_798 0.13 1.7