Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_789

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_788: 9156 - Hypothetical Protein, at 1872405 to 1873287 9156 mRNA_789: 9157 - K14459 HEX hexosaminidase, at 1873668 to 1877392 9157 mRNA_790: 9158 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 1877966 to 1880180 9158

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,873,240 - 0.1
1,873,366 - 0.3
1,873,426 - 0.8
1,873,521 + -0.1
1,873,534 + -0.2
1,873,537 + -0.8
1,873,537 + 0.4
1,873,539 + 0.2
1,873,553 - -1.2
1,873,554 + -0.8
1,873,612 - -2.1
1,873,635 - 0.6
1,873,635 - 0.6
1,873,636 + -1.8
1,873,638 + -0.2
1,873,641 - -2.6
1,873,648 - 0.0
1,873,795 + 0.4
1,873,809 + 0.4
1,873,918 + 0.2
1,874,057 - 9157 mRNA_789 0.10 -1.7
1,874,088 - 9157 mRNA_789 0.11 0.3
1,874,220 + 9157 mRNA_789 0.15 0.1
1,874,773 - 9157 mRNA_789 0.30 0.5
1,874,953 - 9157 mRNA_789 0.34 -0.2
1,875,255 + 9157 mRNA_789 0.43 -1.6
1,875,412 + 9157 mRNA_789 0.47 -0.9
1,875,528 + 9157 mRNA_789 0.50 -0.4
1,875,683 - 9157 mRNA_789 0.54 0.3
1,876,101 - 9157 mRNA_789 0.65 -1.7
1,876,670 + 9157 mRNA_789 0.81 -0.5
1,877,135 + -0.9
1,877,254 + -2.2
1,877,291 + -0.4
1,877,399 + 0.6
1,877,452 - 1.0
1,877,718 - 0.8
1,877,740 + -2.5
1,877,874 - 0.2
1,877,879 + 0.2
1,877,880 + -1.7
1,877,880 + 0.2
1,877,889 + 0.1