Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_300

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707483 to 708587 8667 mRNA_300: 8668 - BLAST transcription factor hoxa13 [Aspergillus bombycis], at 709223 to 712870 8668

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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708,303 + 8667 mRNA_299 0.74 -0.0
708,490 - 0.6
708,731 - -1.3
708,734 - -2.4
708,734 + 0.1
709,004 + -0.6
709,028 + 0.0
709,138 - 0.3
709,159 - 0.0
709,180 + -0.4
709,188 - 2.2
709,215 + 0.3
709,243 - -0.4
709,317 - -0.1
709,342 + -0.2
709,443 - -0.5
709,474 - 0.6
709,502 + -3.3
709,626 - 8668 mRNA_300 0.11 -2.5
709,631 - 8668 mRNA_300 0.11 -0.6
709,916 - 8668 mRNA_300 0.19 2.1
709,945 + 8668 mRNA_300 0.20 -1.7
710,214 - 8668 mRNA_300 0.27 0.1
710,501 + 8668 mRNA_300 0.35 1.6
710,932 - 8668 mRNA_300 0.47 -1.6
710,970 - 8668 mRNA_300 0.48 -0.6
711,209 + 8668 mRNA_300 0.54 -1.1
711,592 - 8668 mRNA_300 0.65 -0.5
711,658 - 8668 mRNA_300 0.67 0.8
712,422 + 8668 mRNA_300 0.88 0.1
712,561 - -2.4
713,004 - -1.0
713,107 - 0.8
713,250 - -0.2
713,278 + 1.8
713,283 + 0.5
713,404 + -2.6
713,417 - 0.3
713,418 - 0.1
713,422 + 1.4
713,423 - 1.2
713,443 + -0.8
713,443 + -3.0
713,447 + -1.2
713,477 - -0.3
713,483 - 0.4
713,490 + -2.2
713,529 + -1.3
713,533 + -2.7
713,537 - -0.3
713,544 - -1.4
713,545 - -2.0
713,547 + 0.0
713,550 + 0.5
713,556 - -0.5
713,563 + 0.9
713,566 - 2.9
713,576 - -2.0
713,581 + -1.6
713,698 - -2.0
713,715 + 0.1
713,716 + 1.1
713,720 - 0.2
713,868 + -0.6