Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_298

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705560 to 707244 8666 mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707483 to 708587 8667

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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705,303 - 0.5
705,430 - -2.4
705,445 + -0.7
706,045 - 8666 mRNA_298 0.29 0.4
706,138 + 8666 mRNA_298 0.34 -1.5
706,171 - 8666 mRNA_298 0.36 0.8
706,321 - 8666 mRNA_298 0.45 -1.5
706,485 + 8666 mRNA_298 0.55 0.0
706,614 - 8666 mRNA_298 0.63 -0.3
706,917 - 8666 mRNA_298 0.81 -0.7
707,073 - 8666 mRNA_298 0.90 0.9
707,093 + 1.1
707,187 + -0.9
707,204 - -0.2
707,334 - -0.1
707,336 - -0.9
707,350 - -0.5
707,364 - 0.0
707,389 + -0.7
707,417 - -2.5
707,426 + 0.3
707,427 - -0.2
707,427 - -0.5
707,538 - -2.1
707,581 + 1.0
707,690 - 8667 mRNA_299 0.19 -2.7
707,691 - 8667 mRNA_299 0.19 -0.6
707,695 + 8667 mRNA_299 0.19 0.1
707,696 + 8667 mRNA_299 0.19 0.2
707,833 - 8667 mRNA_299 0.32 0.5
707,838 + 8667 mRNA_299 0.32 -1.3
707,866 + 8667 mRNA_299 0.35 -0.9
708,024 + 8667 mRNA_299 0.49 -1.1
708,025 + 8667 mRNA_299 0.49 -1.1
708,158 - 8667 mRNA_299 0.61 1.2