Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_202

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_201: 8569 - K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase, at 492772 to 495021 8569 mRNA_202: 8570 - HMMPfam-Frequency clock protein-PF09421, at 495941 to 499437 8570 mRNA_203: 8571 - SUPERFAMILY--SSF51197, at 499764 to 500298 8571 mRNA_204: 8572 - Hypothetical Protein, at 500316 to 500871 8572

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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495,030 + -0.1
495,125 - -0.6
495,147 - -0.6
495,152 + -0.2
495,155 + 0.0
495,155 - 0.1
495,157 - -3.2
495,159 - 0.7
495,162 + -0.0
495,162 + -0.1
495,168 - -1.8
495,169 - -0.4
495,177 - -2.9
495,179 + -1.6
495,180 - -1.0
495,181 + 1.0
495,181 + 1.7
495,182 + 0.1
495,182 + -0.3
495,183 + -1.4
495,186 - 0.4
495,189 + -1.3
495,192 + -2.4
495,201 - 0.4
495,209 + -1.0
495,247 + -0.7
495,495 - -2.7
495,505 - 0.3
496,356 - 8570 mRNA_202 0.12 0.2
496,374 + 8570 mRNA_202 0.12 -0.0
496,508 - 8570 mRNA_202 0.16 0.5
496,546 - 8570 mRNA_202 0.17 -0.7
496,698 + 8570 mRNA_202 0.22 0.4
497,018 - 8570 mRNA_202 0.31 -1.0
497,038 - 8570 mRNA_202 0.31 -0.1
497,054 - 8570 mRNA_202 0.32 -2.8
497,286 - 8570 mRNA_202 0.38 -0.3
497,481 + 8570 mRNA_202 0.44 0.8
497,656 + 8570 mRNA_202 0.49 -0.0
497,926 + 8570 mRNA_202 0.57 1.0
498,047 - 8570 mRNA_202 0.60 0.9
498,779 + 8570 mRNA_202 0.81 0.2
498,916 - 8570 mRNA_202 0.85 0.0
498,939 + 8570 mRNA_202 0.86 -0.5
499,071 - 8570 mRNA_202 0.90 0.1
499,072 + 8570 mRNA_202 0.90 0.9
499,074 + 8570 mRNA_202 0.90 -1.9
499,082 - 8570 mRNA_202 0.90 -0.1
499,085 + 8570 mRNA_202 0.90 1.5
499,186 + 1.3
499,198 + 0.7
499,215 - 0.4
499,221 - 1.0
499,224 - 0.5
499,236 + -1.6
499,238 - 1.0
499,240 + 0.9
499,360 - 0.3
499,369 - -1.9
499,379 + -0.3
499,380 + 0.7
499,382 - -2.7
499,385 + -0.4
499,386 + 1.0
499,500 - -1.0
499,503 + 0.5
499,506 - 0.5
499,516 - 0.3
499,517 - -0.0
499,520 + -0.9
499,523 - -0.4
499,526 + 0.9
499,536 + 1.2
499,538 + -1.3
499,666 - 0.1
499,669 - -1.5
499,813 - -2.6
499,857 + 8571 mRNA_203 0.17 -1.0
499,958 + 8571 mRNA_203 0.36 -2.3
500,100 + 8571 mRNA_203 0.63 0.5
500,110 + 8571 mRNA_203 0.65 -1.0
500,274 - -1.7
500,401 - 8572 mRNA_204 0.15 -1.2
500,425 - 8572 mRNA_204 0.20 -0.8