Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_150

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_149: 8517 - Hypothetical Protein, at 374872 to 375333 8517 mRNA_150: 8518 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 375753 to 378108 8518 mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379065 to 379994 8519

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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374,759 - 0.5
374,820 + 0.5
374,824 - -0.2
374,942 - 8517 mRNA_149 0.15 0.3
374,983 + 8517 mRNA_149 0.24 0.1
375,100 + 8517 mRNA_149 0.49 -1.3
375,131 + 8517 mRNA_149 0.56 0.9
375,138 + 8517 mRNA_149 0.58 -2.0
375,140 + 8517 mRNA_149 0.58 0.3
375,249 + 8517 mRNA_149 0.82 -0.4
375,258 + 8517 mRNA_149 0.84 1.2
376,011 + 8518 mRNA_150 0.11 0.2
376,300 - 8518 mRNA_150 0.23 0.4
376,896 + 8518 mRNA_150 0.49 -1.7
377,138 - 8518 mRNA_150 0.59 -1.4
377,142 - 8518 mRNA_150 0.59 -3.5
377,304 - 8518 mRNA_150 0.66 0.2
377,442 - 8518 mRNA_150 0.72 -0.1
377,586 + 8518 mRNA_150 0.78 -3.0
377,903 - -0.5
378,023 - -1.8
378,076 - -0.9
378,289 - 1.9
378,324 - -0.5
378,327 + -0.6
378,428 + 0.7
378,443 - -2.9
378,465 + 0.5
378,468 - -0.4
378,500 + -1.6
378,610 - -1.7
378,611 - -1.1
378,613 - 1.1
378,614 + 0.1
378,614 - -1.4
378,616 + -0.2
378,618 + -2.1
378,619 - -1.4
378,624 + -0.1
378,629 - 0.5
378,639 - 1.5
378,658 + -3.6
378,663 - -0.7
378,759 - -1.7
378,763 + -0.6
378,769 + -0.2
378,794 - -1.1
378,797 - -2.5
378,797 - -0.1
378,799 - 0.2
378,800 + -1.0
378,804 + -0.9
378,808 + 0.9
378,812 + 0.3
378,813 - 0.4
378,825 + -0.5
378,827 - -2.1
378,829 - -1.2
378,831 - -0.1
378,875 + -1.0
378,954 - -0.5
378,957 - 0.4
378,959 - -1.7
378,994 + -1.0
378,995 - -0.2