Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_75

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174089 to 180350 8442 mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180761 to 182108 8443 mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182247 to 184330 8444

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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180,123 - -1.0
180,125 - -0.1
180,135 + -1.6
180,143 - -0.2
180,149 + -0.2
180,430 + 0.5
180,431 - -0.9
180,435 - 0.1
180,437 - 0.3
180,448 - -0.3
180,455 + -0.3
180,586 - -0.4
180,721 + -0.9
180,893 - 2.2
180,894 + -0.9
181,040 - 8443 mRNA_75 0.21 0.9
181,658 - 8443 mRNA_75 0.67 -0.7
181,762 + 8443 mRNA_75 0.74 -0.6
181,763 - 8443 mRNA_75 0.74 0.3
181,767 - 8443 mRNA_75 0.75 -0.2
181,788 - 8443 mRNA_75 0.76 -1.3
181,914 - 8443 mRNA_75 0.86 -0.9
181,916 + 8443 mRNA_75 0.86 -0.1
181,929 - 8443 mRNA_75 0.87 0.3
182,051 + -0.7
182,063 - -0.0
182,067 - -0.0
182,089 + -0.8
182,214 + 1.3