Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8346

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989216 to 990816 16713 mRNA_8346: 16714 - Hypothetical Protein, at 991012 to 994561 16714 mRNA_8347: 16715 - Hypothetical Protein, at 994910 to 995448 16715 mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995447 to 998474 16716

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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990,429 + 16713 mRNA_8345 0.76 0.2
990,552 - 16713 mRNA_8345 0.83 -0.4
990,992 - 0.4
991,003 + -0.9
991,039 + 0.1
991,323 + 0.1
991,420 + 16714 mRNA_8346 0.11 -0.2
991,448 - 16714 mRNA_8346 0.12 2.1
991,752 - 16714 mRNA_8346 0.21 -1.8
991,917 - 16714 mRNA_8346 0.25 0.4
992,188 + 16714 mRNA_8346 0.33 -0.6
993,204 + 16714 mRNA_8346 0.62 0.7
993,205 - 16714 mRNA_8346 0.62 -1.6
993,374 - 16714 mRNA_8346 0.67 1.0
993,386 - 16714 mRNA_8346 0.67 -0.5
993,624 - 16714 mRNA_8346 0.74 -0.1
993,637 - 16714 mRNA_8346 0.74 0.6
993,942 - 16714 mRNA_8346 0.83 -1.9
994,065 - 16714 mRNA_8346 0.86 -1.6
994,208 - 0.3
994,246 + -1.1
994,250 + 0.0
994,626 - 1.5
994,652 - 0.3
994,653 - 1.4
994,661 - -0.0
994,662 + -1.0
994,677 + 0.1
994,684 + -1.4
994,808 + 0.3
994,811 - -2.5
994,818 - 1.7
994,823 - 0.2
994,840 - 0.1
994,925 - 0.1
994,929 - -1.9
994,930 - -0.6
994,933 - 0.7
994,936 - 0.6
994,939 + -0.1
994,940 + -2.0
994,948 + -0.5
994,948 - -2.2
994,949 + 0.3
994,961 + -0.0
994,967 + 16715 mRNA_8347 0.11 0.0
994,972 - 16715 mRNA_8347 0.12 0.4
994,973 - 16715 mRNA_8347 0.12 -0.8
994,975 - 16715 mRNA_8347 0.12 -0.2
994,978 + 16715 mRNA_8347 0.13 -0.8
995,029 - 16715 mRNA_8347 0.22 0.1
995,048 + 16715 mRNA_8347 0.26 0.6
995,071 - 16715 mRNA_8347 0.30 1.4
995,073 - 16715 mRNA_8347 0.30 -0.7
995,089 + 16715 mRNA_8347 0.33 -0.1
995,090 + 16715 mRNA_8347 0.33 -1.3
995,102 + 16715 mRNA_8347 0.36 -1.7
995,121 + 16715 mRNA_8347 0.39 1.2
995,136 + 16715 mRNA_8347 0.42 -0.4
995,140 - 16715 mRNA_8347 0.43 0.1
995,146 - 16715 mRNA_8347 0.44 0.4
995,147 + 16715 mRNA_8347 0.44 -0.2
995,154 - 16715 mRNA_8347 0.45 0.2
995,155 + 16715 mRNA_8347 0.45 -0.9
995,161 - 16715 mRNA_8347 0.47 -0.1
995,168 - 16715 mRNA_8347 0.48 1.4
995,176 + 16715 mRNA_8347 0.49 -0.9
995,179 - 16715 mRNA_8347 0.50 -0.1
995,194 - 16715 mRNA_8347 0.53 -1.2
995,196 + 16715 mRNA_8347 0.53 1.0
995,207 - 16715 mRNA_8347 0.55 0.4
995,208 + 16715 mRNA_8347 0.55 1.0
995,215 + 16715 mRNA_8347 0.57 -0.4
995,221 + 16715 mRNA_8347 0.58 -0.4
995,222 + 16715 mRNA_8347 0.58 -1.8
995,238 - 16715 mRNA_8347 0.61 -1.5
995,267 + 16715 mRNA_8347 0.66 -0.7
995,283 - 16715 mRNA_8347 0.69 -1.4
995,293 + 16715 mRNA_8347 0.71 -0.7
995,301 - 16715 mRNA_8347 0.73 -0.2
995,307 - 16715 mRNA_8347 0.74 0.7
995,308 - 16715 mRNA_8347 0.74 0.2
995,310 - 16715 mRNA_8347 0.74 2.1
995,314 - 16715 mRNA_8347 0.75 -0.1
995,316 - 16715 mRNA_8347 0.75 -0.2
995,329 - 16715 mRNA_8347 0.78 -0.0
995,339 - 16715 mRNA_8347 0.80 -1.1
995,350 - 16715 mRNA_8347 0.82 -0.7
995,352 + 16715 mRNA_8347 0.82 0.3
995,353 - 16715 mRNA_8347 0.82 0.4
995,354 + 16715 mRNA_8347 0.82 -0.4
995,370 - 16715 mRNA_8347 0.85 -1.7
995,373 + 16715 mRNA_8347 0.86 -1.6
995,373 - 16715 mRNA_8347 0.86 -0.6
995,376 + 16715 mRNA_8347 0.86 -3.0
995,376 + 16715 mRNA_8347 0.86 -3.1
995,444 - -0.3
995,465 - 1.2
995,487 - -0.1
995,548 + 3.2
995,560 - -0.4