Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8240

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8239: 16607 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 738207 to 740675 16607 mRNA_8240: 16608 - K14350 AADACL2 arylacetamide deacetylase-like 2, at 740976 to 744696 16608 mRNA_8241: 16609 - Hypothetical Protein, at 744876 to 746640 16609

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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740,086 - 16607 mRNA_8239 0.76 -3.8
740,230 + 16607 mRNA_8239 0.82 0.5
740,522 - -0.8
740,662 + -2.9
740,685 + 0.3
740,809 - -1.3
740,811 - -0.8
740,819 - 0.0
740,834 - -0.6
740,946 + -2.0
740,984 - -0.2
741,123 + -0.7
741,435 - 16608 mRNA_8240 0.12 -0.0
741,715 + 16608 mRNA_8240 0.20 -0.1
742,263 - 16608 mRNA_8240 0.35 0.7
742,423 - 16608 mRNA_8240 0.39 -0.0
742,551 - 16608 mRNA_8240 0.42 -0.1
742,700 + 16608 mRNA_8240 0.46 -1.0
742,708 - 16608 mRNA_8240 0.47 1.0
743,125 + 16608 mRNA_8240 0.58 0.6
743,238 - 16608 mRNA_8240 0.61 -1.5
743,406 - 16608 mRNA_8240 0.65 -0.5
743,414 + 16608 mRNA_8240 0.66 0.6
743,751 - 16608 mRNA_8240 0.75 -1.3
744,394 - -1.7
745,138 + 16609 mRNA_8241 0.15 -0.5
745,459 - 16609 mRNA_8241 0.33 -0.1
745,673 + 16609 mRNA_8241 0.45 0.4