Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8172

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8172: 16540 - K17592 SACS sacsin, at 590465 to 596519 16540 mRNA_8173: 16541 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 596757 to 597514 16541

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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589,652 + 1.4
589,692 + -0.8
589,835 + 0.5
589,987 - -1.2
590,106 - -1.7
590,112 - -4.3
590,123 + 0.4
590,256 + -0.6
590,258 - 1.0
590,268 + 1.0
590,270 + -1.0
590,294 - -0.4
590,427 + 0.1
590,452 - -0.6
590,594 - -0.3
590,790 - -1.7
591,057 + -0.6
591,306 - 16540 mRNA_8172 0.14 -0.5
591,315 + 16540 mRNA_8172 0.14 -0.2
591,486 + 16540 mRNA_8172 0.17 -1.2
591,592 - 16540 mRNA_8172 0.19 -1.6
591,754 - 16540 mRNA_8172 0.21 -1.1
592,493 + 16540 mRNA_8172 0.33 -1.5
592,836 + 16540 mRNA_8172 0.39 -2.4
592,917 - 16540 mRNA_8172 0.40 -0.4
593,098 - 16540 mRNA_8172 0.43 0.8
593,885 - 16540 mRNA_8172 0.56 -0.5
594,434 + 16540 mRNA_8172 0.66 -1.1
594,441 + 16540 mRNA_8172 0.66 -0.5
594,453 + 16540 mRNA_8172 0.66 -2.4
595,137 + 16540 mRNA_8172 0.77 -2.6
595,285 - 16540 mRNA_8172 0.80 -0.2
595,676 - 16540 mRNA_8172 0.86 -1.0
595,787 - 16540 mRNA_8172 0.88 -2.6
595,921 - -2.9
596,404 - -1.2
596,532 + -0.3
596,941 + 16541 mRNA_8173 0.24 -2.0