Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8156

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545872 to 548769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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544,872 - 0.2
544,880 + 1.5
545,039 - 0.6
545,180 - -0.1
545,342 + 1.3
545,459 + -0.6
545,470 + -2.3
545,490 - -0.2
545,649 - -0.2
545,710 + -0.6
545,778 - -1.5
545,784 - 0.7
545,786 - -1.0
545,905 + -1.3
546,099 + -0.7
546,251 + 16524 mRNA_8156 0.13 -2.0
546,502 + 16524 mRNA_8156 0.22 -1.3
546,943 + 16524 mRNA_8156 0.37 0.0
547,110 + 16524 mRNA_8156 0.43 -2.2
547,129 - 16524 mRNA_8156 0.43 -0.5
547,146 - 16524 mRNA_8156 0.44 -1.2
547,175 - 16524 mRNA_8156 0.45 -1.2
547,216 - 16524 mRNA_8156 0.46 -4.0
547,394 - 16524 mRNA_8156 0.53 -3.2
547,486 - 16524 mRNA_8156 0.56 -3.1
547,536 - 16524 mRNA_8156 0.57 -2.5
547,579 - 16524 mRNA_8156 0.59 -3.1
547,681 + 16524 mRNA_8156 0.62 -2.7
547,724 + 16524 mRNA_8156 0.64 -3.2
548,131 - 16524 mRNA_8156 0.78 -0.2
548,244 - 16524 mRNA_8156 0.82 -1.2
548,527 + -1.5
548,561 + -2.7
548,562 - -2.7
548,581 + -3.6
548,630 - -1.8
548,792 - -3.1
548,801 + -2.5
548,823 + -2.0
548,843 - -1.2
548,846 - -0.0
548,847 - -1.9
548,850 + -4.0
548,860 + -2.3
548,863 + -0.9
548,865 + -1.6
548,940 - -0.7
548,961 - -3.3
548,963 - -3.6
548,964 - -3.7
548,966 + -1.6
548,973 - -0.7
548,974 - -3.4
548,987 + -3.3
548,990 + -2.8
548,992 + -3.0
548,995 - -4.5
549,025 - -0.2
549,025 - -3.1
549,027 + -2.3
549,029 - -4.5
549,030 - -2.6
549,036 + -3.3
549,044 + -3.8
549,045 + -3.5
549,059 - -4.0
549,064 + -2.8
549,064 + -2.1
549,108 + -1.1
549,109 + -2.0
549,109 - -2.5
549,140 - -3.1
549,143 - -1.0
549,207 + -1.5
549,230 + -3.2
549,275 + -2.4
549,276 + -2.8
549,285 + -5.8
549,286 - -0.4
549,287 - -0.3
549,291 - -2.6
549,293 - -0.9
549,293 - -3.5
549,297 - -0.4
549,298 - -0.9
549,299 + -3.1
549,299 - 2.0
549,300 + -2.1
549,302 - -1.3
549,314 - -3.0
549,323 + -1.5
549,324 + -0.8
549,332 - -1.5
549,333 - -3.4
549,333 - -0.3
549,334 + -2.7
549,335 + -3.2
549,341 + -1.5
549,346 + -1.0
549,349 + -1.5
549,361 + -0.9
549,364 + -0.2
549,364 - -1.4
549,405 - -1.3
549,406 + 1.1
549,419 - -1.4
549,423 - -0.4
549,424 + -0.2
549,424 - -1.6
549,426 + -0.4
549,429 - -0.1
549,430 - -3.1
549,435 + -1.2
549,435 - -0.0
549,440 + -0.3
549,441 + -1.6
549,469 + -2.7
549,482 - 0.4
549,566 - 0.1
549,576 - -2.0
549,595 + 0.9
549,597 - -0.1
549,598 + 0.5
549,610 - 0.1
549,616 + -3.1
549,619 + -1.6
549,624 + -2.4
549,625 - -0.5
549,634 + 0.1
549,642 - -0.5
549,645 + -2.9
549,654 + -1.8
549,659 - -1.5
549,672 - -0.7
549,682 - 0.1
549,685 - -1.2
549,686 + -2.1
549,687 - -0.6
549,689 + -1.1
549,692 + -1.8
549,700 - -0.7
549,701 + -0.4
549,713 + -2.6
549,713 + -3.2
549,746 + 0.0
549,754 + -2.1