Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8143

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513309 to 514169 16510 mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514530 to 515609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515756 to 518130 16512

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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513,541 + 16510 mRNA_8142 0.27 0.5
513,967 + 16510 mRNA_8142 0.76 0.6
514,121 + 0.4
514,145 + -1.0
514,349 - 0.6
514,381 - -0.6
515,428 + 16511 mRNA_8143 0.83 0.2
515,524 + -1.0
515,565 + 0.2
515,682 - -0.7
515,750 - -0.7
515,847 - 1.0
515,848 - -4.0
515,985 - 1.3
516,007 + 16512 mRNA_8144 0.11 -0.3
516,109 + 16512 mRNA_8144 0.15 -0.8
516,141 + 16512 mRNA_8144 0.16 0.2
516,150 + 16512 mRNA_8144 0.17 -0.4
516,300 - 16512 mRNA_8144 0.23 -0.4
516,302 + 16512 mRNA_8144 0.23 -3.7
516,336 + 16512 mRNA_8144 0.24 2.2