Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8117

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8116: 16484 - K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase, at 453564 to 454690 16484 mRNA_8117: 16485 - K06041 kdsD, kpsF arabinose-5-phosphate isomerase, at 455080 to 456482 16485 mRNA_8118: 16486 - Hypothetical Protein, at 456909 to 458986 16486

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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454,450 + 16484 mRNA_8116 0.79 -3.0
454,726 - -1.4
454,733 - -2.3
454,743 - 0.5
454,745 - 0.1
454,751 + -0.5
454,753 + 0.1
454,761 + 1.5
454,761 + 0.5
454,766 + -1.8
454,816 - -1.3
454,881 - -2.4
454,935 + -0.9
454,943 - -1.4
454,945 - -3.9
454,949 + 0.3
454,950 + -0.2
454,951 - 1.2
454,951 - -0.3
454,952 - -0.8
454,952 + 0.5
454,953 + 1.2
454,953 + 0.2
454,953 + -0.0
454,956 - -0.1
454,957 + -1.8
454,958 - 0.5
454,959 - -0.6
454,962 + -3.5
454,962 + -0.0
454,965 - 0.9
454,966 - -0.0
454,968 + -1.8
454,969 + 0.4
454,970 + 0.4
454,971 + 0.2
454,973 + -1.6
454,973 + -1.3
454,977 - -1.2
454,994 + -0.5
454,994 - 1.0
454,994 - -2.2
454,996 - -1.2
454,997 + 2.2
454,997 + -3.0
455,011 - -2.5
455,015 - 0.5
455,019 + -0.8
455,021 - -0.5
455,024 + 0.5
455,150 - -0.7
455,161 + -1.2
455,163 + 0.1
455,188 + -0.4
455,189 - -3.0
455,191 - -1.5
455,337 + 16485 mRNA_8117 0.18 -1.4
455,592 + 16485 mRNA_8117 0.36 0.4
455,766 - 16485 mRNA_8117 0.49 1.0
455,896 + 16485 mRNA_8117 0.58 -0.5
455,901 + 16485 mRNA_8117 0.59 -0.9
455,910 + 16485 mRNA_8117 0.59 -0.2
456,205 - 16485 mRNA_8117 0.80 -1.6
456,467 + 0.4
456,639 - 2.6
456,807 - 0.5
457,275 + 16486 mRNA_8118 0.18 0.2
457,276 - 16486 mRNA_8118 0.18 -0.3