Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7921

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24120 to 24922 16288 mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25144 to 26524 16289 mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27039 to 30180 16290

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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24,299 - 16288 mRNA_7920 0.22 0.7
24,319 + 16288 mRNA_7920 0.25 1.4
24,323 - 16288 mRNA_7920 0.25 1.5
24,434 + 16288 mRNA_7920 0.39 -2.5
24,640 + 16288 mRNA_7920 0.65 -2.0
24,923 + 0.0
24,998 - 0.1
25,057 + -0.9
25,077 + 1.0
26,278 + 16289 mRNA_7921 0.82 0.9
26,518 - 0.6
26,523 + -0.1
26,527 + -3.7
26,531 - 0.8
26,558 - 1.0
26,650 - -2.0
26,674 - 0.6
26,676 - -2.2
26,681 - 1.4
26,683 + 0.3
26,696 + -0.5
26,697 - 0.1
26,702 + 1.0
26,713 + 1.5
26,840 - 1.2
26,842 - -2.1
26,844 - -2.5
26,847 + -2.6
26,849 - -1.6
26,851 + -0.3
26,852 - 0.5
26,856 + 2.4
26,873 - -0.4
26,896 + 0.9
26,902 + -0.0
27,132 - -0.7