Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7877

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1278407 to 1280463 16244 mRNA_7877: 16245 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1280772 to 1282226 16245 mRNA_7878: 16246 - K14400 PCF11 pre-mRNA cleavage complex 2 protein Pcf11, at 1282448 to 1285814 16246

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,279,909 - 16244 mRNA_7876 0.73 1.3
1,279,968 - 16244 mRNA_7876 0.76 0.9
1,280,163 - 16244 mRNA_7876 0.85 -1.1
1,280,381 + 0.9
1,280,577 + -2.7
1,280,589 + -2.4
1,280,662 + -2.3
1,280,677 - -1.3
1,280,691 - -0.3
1,280,983 + 16245 mRNA_7877 0.15 -1.0
1,281,005 - 16245 mRNA_7877 0.16 -0.8
1,281,095 + 16245 mRNA_7877 0.22 -1.6
1,281,152 + 16245 mRNA_7877 0.26 1.1
1,281,187 - 16245 mRNA_7877 0.29 1.2
1,281,315 + 16245 mRNA_7877 0.37 -1.0
1,281,414 - 16245 mRNA_7877 0.44 -0.0
1,281,763 + 16245 mRNA_7877 0.68 0.5
1,281,899 + 16245 mRNA_7877 0.77 -0.7
1,282,044 - 16245 mRNA_7877 0.87 0.2
1,282,083 - -0.9
1,282,178 + -0.7
1,282,187 + -2.5
1,282,220 + -0.8
1,282,239 - -2.5
1,282,487 + 0.5
1,282,784 + 0.7