Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7845

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7845: 16213 - K14154 THI6 thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase, at 1199840 to 1202125 16213 mRNA_7846: 16214 - K04460 PPP5C serine/threonine-protein phosphatase 5, at 1202392 to 1204902 16214

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,199,030 - -0.2
1,199,074 - 0.2
1,199,085 - 0.4
1,199,344 + 0.9
1,199,392 + 0.9
1,199,615 + 0.3
1,199,682 + -0.4
1,199,685 + 0.6
1,199,698 + 0.3
1,199,710 + -1.0
1,199,809 + -1.6
1,199,845 + 0.5
1,199,943 - 0.8
1,199,984 + -0.5
1,200,051 + -1.3
1,200,124 - 16213 mRNA_7845 0.12 -0.1
1,200,128 + 16213 mRNA_7845 0.13 -0.1
1,200,148 + 16213 mRNA_7845 0.13 -0.0
1,200,156 - 16213 mRNA_7845 0.14 -0.5
1,200,408 - 16213 mRNA_7845 0.25 -0.8
1,200,530 + 16213 mRNA_7845 0.30 -2.5
1,200,533 - 16213 mRNA_7845 0.30 -0.7
1,200,545 - 16213 mRNA_7845 0.31 -1.4
1,200,559 + 16213 mRNA_7845 0.31 0.4
1,200,572 + 16213 mRNA_7845 0.32 1.4
1,200,687 + 16213 mRNA_7845 0.37 0.3
1,200,998 + 16213 mRNA_7845 0.51 -1.0
1,201,320 + 16213 mRNA_7845 0.65 0.3
1,201,416 - 16213 mRNA_7845 0.69 0.2
1,201,443 + 16213 mRNA_7845 0.70 -0.3
1,201,479 - 16213 mRNA_7845 0.72 -0.1
1,201,479 + 16213 mRNA_7845 0.72 0.0
1,201,558 - 16213 mRNA_7845 0.75 0.3
1,202,157 + -1.5
1,202,323 - -0.1
1,202,330 + 0.5
1,202,401 - -0.3
1,202,637 + 0.5
1,202,738 + 16214 mRNA_7846 0.14 -1.3
1,202,750 - 16214 mRNA_7846 0.14 1.2
1,202,759 + 16214 mRNA_7846 0.15 1.5
1,202,760 - 16214 mRNA_7846 0.15 -2.1
1,202,852 + 16214 mRNA_7846 0.18 -0.8
1,202,892 + 16214 mRNA_7846 0.20 -0.4
1,202,894 - 16214 mRNA_7846 0.20 -0.3
1,203,012 - 16214 mRNA_7846 0.25 -0.8