Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7493

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7492: 15860 - KOG2301 Voltage-gated Ca2+ channels, alpha1 subunits, at 413900 to 421307 15860 mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421579 to 423387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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420,648 - -1.8
420,869 + 1.2
420,939 - -2.5
420,957 - -2.4
421,093 - -3.2
421,120 - -2.0
421,253 + 0.7
421,408 - -0.5
421,665 - 0.7
421,666 - -0.9
421,677 - -0.6
421,678 - -0.9
421,681 - -1.3
421,689 - 0.7
421,690 + 0.9
421,692 - -1.8
421,694 + 0.6
421,697 + -0.5
421,842 + 15861 mRNA_7493 0.15 0.5
421,969 - 15861 mRNA_7493 0.22 -0.3
421,970 - 15861 mRNA_7493 0.22 -1.1
421,976 + 15861 mRNA_7493 0.22 0.0
421,988 - 15861 mRNA_7493 0.23 2.0
422,126 + 15861 mRNA_7493 0.30 -1.2
422,272 + 15861 mRNA_7493 0.38 0.2
422,307 + 15861 mRNA_7493 0.40 -0.8
422,378 + 15861 mRNA_7493 0.44 1.1
422,445 + 15861 mRNA_7493 0.48 -1.2
422,574 - 15861 mRNA_7493 0.55 -1.0
422,580 + 15861 mRNA_7493 0.55 -0.9
422,708 + 15861 mRNA_7493 0.62 0.4
423,359 - -0.4
423,359 + -1.4
423,715 + 15862 mRNA_7494 0.10 -0.6
424,015 - 15862 mRNA_7494 0.26 -1.5
424,144 - 15862 mRNA_7494 0.33 -0.7
424,281 - 15862 mRNA_7494 0.40 -1.2