Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7342

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7341: 15709 - KOG4062 6-O-methylguanine-DNA methyltransferase MGMT/MGT1, involved in DNA repair, at 41862 to 42699 15709 mRNA_7342: 15710 - Hypothetical Protein, at 43163 to 45525 15710 mRNA_7343: 15711 - K04798 pfdB, PFDN6 prefoldin beta subunit, at 45735 to 46573 15711

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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42,238 - 15709 mRNA_7341 0.45 -1.3
42,344 + 15709 mRNA_7341 0.58 -0.9
42,392 - 15709 mRNA_7341 0.63 -0.6
42,697 - -0.8
42,701 + 1.0
42,823 - 0.3
42,973 + -0.3
43,061 + 0.9
43,078 - -1.7
43,399 + 0.0
43,712 + 15710 mRNA_7342 0.23 0.2
43,899 - 15710 mRNA_7342 0.31 -1.2
43,976 + 15710 mRNA_7342 0.34 2.4
44,353 + 15710 mRNA_7342 0.50 -0.7
44,409 - 15710 mRNA_7342 0.53 -0.4
44,409 - 15710 mRNA_7342 0.53 -0.2
44,718 + 15710 mRNA_7342 0.66 0.5
44,841 - 15710 mRNA_7342 0.71 -0.5
45,006 + 15710 mRNA_7342 0.78 -0.7
45,301 + -0.5
45,302 + 0.6
45,583 + -1.5
45,590 + 0.6
45,728 + -1.3
45,728 + -1.5
46,292 - 15711 mRNA_7343 0.66 -0.1