Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7328

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15080 to 16504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16802 to 18584 15696

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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16,260 - 15695 mRNA_7327 0.83 0.5
16,270 - 15695 mRNA_7327 0.84 0.3
16,314 + 15695 mRNA_7327 0.87 -1.3
16,588 + -0.7
16,598 + -1.5
16,769 - -1.4
16,797 + 1.0
17,098 - 15696 mRNA_7328 0.17 -1.0
17,165 + 15696 mRNA_7328 0.20 0.1
17,318 + 15696 mRNA_7328 0.29 0.1
17,592 + 15696 mRNA_7328 0.44 -0.5
17,597 - 15696 mRNA_7328 0.45 -1.4
17,708 + 15696 mRNA_7328 0.51 -2.7
17,731 - 15696 mRNA_7328 0.52 -2.5
17,895 - 15696 mRNA_7328 0.61 0.1
18,001 + 15696 mRNA_7328 0.67 -0.9
18,174 - 15696 mRNA_7328 0.77 0.1
18,187 + 15696 mRNA_7328 0.78 -1.5
18,193 + 15696 mRNA_7328 0.78 1.4
18,195 + 15696 mRNA_7328 0.78 0.5
18,290 - 15696 mRNA_7328 0.83 -2.5
18,345 + 15696 mRNA_7328 0.87 -0.1
18,433 - -0.6
18,488 + 0.5
18,600 - 0.5
18,618 - 0.3
18,813 + -0.0
19,048 - -0.5
19,062 - -2.7
19,122 + -0.4
19,182 - 1.0
19,219 - -1.1
19,227 + 2.1
19,227 + 0.7
19,228 - -1.4
19,336 - 0.9
19,338 - -0.7
19,343 + 0.8
19,356 - -1.5
19,369 - 0.9
19,503 + 0.1