Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7116

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915636 to 918075 15483 mRNA_7116: 15484 - K04393 CDC42 cell division control protein 42, at 918589 to 919535 15484 mRNA_7117: 15485 - K12868 SYF2 pre-mRNA-splicing factor SYF2, at 920299 to 921602 15485

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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917,602 + 15483 mRNA_7115 0.81 -4.0
917,728 + 15483 mRNA_7115 0.86 -3.5
917,863 - -1.0
917,880 + -2.6
917,999 - -4.3
918,120 - 1.0
918,144 + 0.9
918,147 - 0.9
918,153 - -0.7
918,153 + -1.4
918,153 + -0.5
918,166 - -0.5
918,186 - -1.7
918,192 + -0.2
918,305 - 1.3
918,445 + -0.3
918,736 + 15484 mRNA_7116 0.16 2.1
918,863 - 15484 mRNA_7116 0.29 3.1
919,302 + 15484 mRNA_7116 0.75 3.3
919,304 + 15484 mRNA_7116 0.76 1.9
919,337 + 15484 mRNA_7116 0.79 2.8
919,451 + 2.4
919,487 - 2.8
919,496 + 2.4
919,515 - 1.3
919,588 + 2.8
919,598 - 2.4
919,623 + 3.3
919,624 + 3.2
919,636 + 2.6
919,790 - 1.9
919,791 + 2.9
919,794 + 2.6
919,800 + 2.5
919,937 - 2.8
919,942 - 1.1
920,082 - 0.4
920,083 + -2.0
920,107 + 0.8
920,108 + -0.2
920,112 - -1.4
920,237 + -1.2
920,238 + -0.9
920,251 + -0.5
920,255 + 0.8