Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7078

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827085 to 831280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831735 to 832558 15446 mRNA_7079: 15447 - Hypothetical Protein, at 833021 to 833925 15447

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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830,834 - 15445 mRNA_7077 0.89 0.7
830,842 + 15445 mRNA_7077 0.90 0.8
830,973 + 0.2
831,111 + 0.7
831,121 - 0.8
831,251 + 0.3
831,270 + 0.0
831,280 + 1.0
831,372 + -1.1
831,399 - 0.3
831,412 - 0.8
831,539 + 0.1
831,556 - 0.9
831,558 - -1.2
831,558 - -0.2
831,565 - -1.2
831,575 + 0.1
831,579 + -0.3
831,584 - -2.7
831,585 + 0.9
831,586 - -0.6
831,586 - 0.0
831,592 + 1.4
831,598 - 1.0
831,604 + -1.5
831,610 + -0.7
831,653 - -0.7
831,666 + 0.5
831,756 + 0.6
831,856 + 15446 mRNA_7078 0.15 0.9
832,583 - -0.5
832,593 + -0.1
832,723 - 0.2
832,728 + -0.6
832,731 - -1.2
832,764 - -0.6
832,985 - -1.8
832,987 - -3.5
833,111 - 0.8
833,130 + 15447 mRNA_7079 0.12 0.6
833,142 - 15447 mRNA_7079 0.13 -0.1
833,281 - 15447 mRNA_7079 0.29 -0.7
833,305 + 15447 mRNA_7079 0.31 -0.3
833,422 - 15447 mRNA_7079 0.44 -1.6
833,444 - 15447 mRNA_7079 0.47 -1.4
833,444 + 15447 mRNA_7079 0.47 -1.1