Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6881

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248 mRNA_6881: 15249 - Hypothetical Protein, at 344637 to 347114 15249 mRNA_6882: 15250 - Hypothetical Protein, at 347533 to 348159 15250

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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343,753 + 15248 mRNA_6880 0.72 3.0
343,801 - 15248 mRNA_6880 0.75 -0.9
343,821 - 15248 mRNA_6880 0.76 -0.9
343,982 - 15248 mRNA_6880 0.86 -2.5
344,024 - 15248 mRNA_6880 0.89 -2.7
344,110 - -1.2
344,127 - -2.4
344,129 - -1.9
344,141 + -1.4
344,314 + -4.2
344,422 + 0.2
344,423 + 0.2
344,428 + -3.1
344,430 + -2.2
344,453 - -0.1
344,462 + -1.2
344,463 - -2.7
344,470 + 1.0
344,475 + -2.4
344,546 - -1.4
344,551 + 2.3
344,585 + 0.0
344,585 + -0.9
344,587 + -1.3
344,587 + 1.2
344,615 - -0.2
344,713 + -0.4
344,726 + 1.0
345,068 + 15249 mRNA_6881 0.17 0.5
345,145 - 15249 mRNA_6881 0.21 1.2
345,178 + 15249 mRNA_6881 0.22 0.1
345,198 + 15249 mRNA_6881 0.23 0.7
345,199 + 15249 mRNA_6881 0.23 0.2
345,349 - 15249 mRNA_6881 0.29 0.8
345,357 + 15249 mRNA_6881 0.29 -0.5
345,367 + 15249 mRNA_6881 0.29 -0.4
345,432 - 15249 mRNA_6881 0.32 0.5
345,465 - 15249 mRNA_6881 0.33 -0.0
345,488 + 15249 mRNA_6881 0.34 -0.0
345,489 - 15249 mRNA_6881 0.34 -1.2
345,499 + 15249 mRNA_6881 0.35 0.2
345,510 - 15249 mRNA_6881 0.35 -0.1
345,624 - 15249 mRNA_6881 0.40 0.3
345,630 + 15249 mRNA_6881 0.40 -2.2
345,641 - 15249 mRNA_6881 0.41 0.2
345,642 + 15249 mRNA_6881 0.41 -0.2
345,643 + 15249 mRNA_6881 0.41 0.1
345,644 + 15249 mRNA_6881 0.41 1.5
345,645 - 15249 mRNA_6881 0.41 0.4
345,649 - 15249 mRNA_6881 0.41 -0.2
345,658 + 15249 mRNA_6881 0.41 -1.2
345,662 - 15249 mRNA_6881 0.41 -1.0
345,665 - 15249 mRNA_6881 0.41 -0.7
345,666 - 15249 mRNA_6881 0.42 0.3
345,667 + 15249 mRNA_6881 0.42 -1.0
345,668 - 15249 mRNA_6881 0.42 -3.1
345,674 - 15249 mRNA_6881 0.42 -0.1
345,676 + 15249 mRNA_6881 0.42 0.4
345,677 + 15249 mRNA_6881 0.42 -0.2
345,679 - 15249 mRNA_6881 0.42 -0.8
345,680 + 15249 mRNA_6881 0.42 0.1
345,687 - 15249 mRNA_6881 0.42 1.1
345,687 - 15249 mRNA_6881 0.42 -0.0
345,688 + 15249 mRNA_6881 0.42 -0.6
345,688 + 15249 mRNA_6881 0.42 0.2
345,693 - 15249 mRNA_6881 0.43 0.4
345,702 + 15249 mRNA_6881 0.43 1.1
345,705 + 15249 mRNA_6881 0.43 -0.0
345,707 - 15249 mRNA_6881 0.43 0.0
345,709 + 15249 mRNA_6881 0.43 0.0
345,721 + 15249 mRNA_6881 0.44 0.0
345,724 + 15249 mRNA_6881 0.44 1.6
345,725 - 15249 mRNA_6881 0.44 2.6
345,736 - 15249 mRNA_6881 0.44 -1.5
345,736 - 15249 mRNA_6881 0.44 0.5
345,738 - 15249 mRNA_6881 0.44 0.3
345,741 + 15249 mRNA_6881 0.45 -0.2
345,749 + 15249 mRNA_6881 0.45 -0.2
345,750 - 15249 mRNA_6881 0.45 -0.1
345,753 + 15249 mRNA_6881 0.45 -1.0
345,767 + 15249 mRNA_6881 0.46 -0.7
345,769 + 15249 mRNA_6881 0.46 -0.9
345,832 + 15249 mRNA_6881 0.48 0.5
345,853 - 15249 mRNA_6881 0.49 -0.3
345,854 - 15249 mRNA_6881 0.49 -1.0
345,855 - 15249 mRNA_6881 0.49 -1.3
345,856 - 15249 mRNA_6881 0.49 -1.0
345,862 + 15249 mRNA_6881 0.49 -0.3
345,865 + 15249 mRNA_6881 0.50 0.0
345,873 - 15249 mRNA_6881 0.50 0.0
345,873 + 15249 mRNA_6881 0.50 -2.1
345,878 + 15249 mRNA_6881 0.50 0.1
345,880 - 15249 mRNA_6881 0.50 -2.3
345,881 - 15249 mRNA_6881 0.50 -0.2
345,883 + 15249 mRNA_6881 0.50 0.8
345,902 - 15249 mRNA_6881 0.51 -1.1
345,915 - 15249 mRNA_6881 0.52 1.4
345,935 - 15249 mRNA_6881 0.52 0.3
345,935 - 15249 mRNA_6881 0.52 1.4
345,939 - 15249 mRNA_6881 0.53 -2.9
345,951 - 15249 mRNA_6881 0.53 -0.3
345,955 - 15249 mRNA_6881 0.53 1.3
345,958 - 15249 mRNA_6881 0.53 -0.8
345,958 - 15249 mRNA_6881 0.53 2.8
345,959 + 15249 mRNA_6881 0.53 -0.8
345,962 + 15249 mRNA_6881 0.53 1.7
345,965 - 15249 mRNA_6881 0.54 -0.2
345,967 - 15249 mRNA_6881 0.54 -1.5
345,973 - 15249 mRNA_6881 0.54 2.7
345,974 + 15249 mRNA_6881 0.54 -2.0
345,977 - 15249 mRNA_6881 0.54 -1.3
345,979 - 15249 mRNA_6881 0.54 0.0
345,979 + 15249 mRNA_6881 0.54 1.0
345,979 + 15249 mRNA_6881 0.54 0.3
345,981 + 15249 mRNA_6881 0.54 -1.5
345,986 - 15249 mRNA_6881 0.54 -0.4
345,986 + 15249 mRNA_6881 0.54 -0.5
345,988 + 15249 mRNA_6881 0.55 -0.9
345,990 - 15249 mRNA_6881 0.55 0.1
345,990 - 15249 mRNA_6881 0.55 0.2
345,993 + 15249 mRNA_6881 0.55 -1.3
345,999 + 15249 mRNA_6881 0.55 -0.3
346,001 + 15249 mRNA_6881 0.55 0.0
346,004 + 15249 mRNA_6881 0.55 0.2
346,008 + 15249 mRNA_6881 0.55 0.6
346,008 + 15249 mRNA_6881 0.55 -0.7
346,010 + 15249 mRNA_6881 0.55 -0.0
346,016 - 15249 mRNA_6881 0.56 0.6
346,027 - 15249 mRNA_6881 0.56 -0.5
346,036 + 15249 mRNA_6881 0.56 0.3
346,055 + 15249 mRNA_6881 0.57 1.1
346,189 + 15249 mRNA_6881 0.63 -0.4
346,260 + 15249 mRNA_6881 0.65 -1.5
346,260 - 15249 mRNA_6881 0.65 0.4
346,273 - 15249 mRNA_6881 0.66 0.8
346,298 + 15249 mRNA_6881 0.67 -1.1
346,391 - 15249 mRNA_6881 0.71 -0.1
346,398 + 15249 mRNA_6881 0.71 0.8
346,429 + 15249 mRNA_6881 0.72 0.2
346,507 - 15249 mRNA_6881 0.75 0.8
346,517 + 15249 mRNA_6881 0.76 -2.4
346,763 - 15249 mRNA_6881 0.86 0.2
346,868 + 0.1
346,874 + 0.1
347,116 - -0.6
347,448 - 2.5
347,453 + 0.3
347,453 - -1.1
347,589 + -1.2
347,595 + 0.0
347,611 + 15250 mRNA_6882 0.12 -0.8
347,873 + 15250 mRNA_6882 0.54 1.3
348,022 + 15250 mRNA_6882 0.78 0.9