Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6788

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125988 to 127224 15154 mRNA_6787: 15155 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 127368 to 127805 15155 mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127975 to 131651 15156 mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131775 to 132958 15157

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
127,838 - -0.8
127,841 + 0.3
127,863 + -0.1
127,863 - -1.9
127,864 + -1.8
127,866 - -0.4
127,867 - 0.4
128,011 - -0.2
128,013 + -1.6
128,029 + -0.1
128,058 + -0.7
128,340 + -0.3
128,381 - 15156 mRNA_6788 0.11 -2.2
129,079 + 15156 mRNA_6788 0.30 -1.8
129,349 + 15156 mRNA_6788 0.37 0.5
129,690 + 15156 mRNA_6788 0.47 -2.1
129,696 + 15156 mRNA_6788 0.47 -2.2
129,941 - 15156 mRNA_6788 0.53 -0.2
129,971 - 15156 mRNA_6788 0.54 0.5
130,209 - 15156 mRNA_6788 0.61 -0.7
130,232 - 15156 mRNA_6788 0.61 -3.2
130,680 - 15156 mRNA_6788 0.74 -2.4
131,007 - 15156 mRNA_6788 0.82 -1.4
131,199 + 15156 mRNA_6788 0.88 2.8
131,215 - 15156 mRNA_6788 0.88 -0.1
131,233 + 15156 mRNA_6788 0.89 -1.7
131,369 - -0.2
131,574 - -3.4
131,727 + -0.6
131,817 - 0.5
132,175 + 15157 mRNA_6789 0.34 -0.4
132,449 + 15157 mRNA_6789 0.57 -1.4
132,612 - 15157 mRNA_6789 0.71 -0.4