Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6723

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6722: 15090 - K17908 WIPI, ATG18 autophagy-related protein 18, at 1539294 to 1541156 15090 mRNA_6723: 15091 - K01078 E3.1.3.2 acid phosphatase, at 1542029 to 1544062 15091 mRNA_6724: 15092 - HMMPfam-Voltage-dependent anion channel-PF03595, at 1544155 to 1546536 15092

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
1,541,215 - -1.2
1,541,255 - -0.2
1,541,510 - -2.0
1,541,644 + 1.6
1,541,806 - 0.1
1,541,815 - -1.1
1,541,820 + -1.1
1,541,930 - 1.9
1,541,935 - 0.4
1,541,938 + 0.6
1,541,947 - 0.9
1,541,948 - -2.1
1,542,005 - -0.5
1,542,084 - -0.2
1,542,097 - 0.8
1,542,193 - 1.0
1,542,257 + 15091 mRNA_6723 0.11 -0.8
1,542,280 - 15091 mRNA_6723 0.12 -0.8
1,542,353 - 15091 mRNA_6723 0.16 -0.1
1,542,389 - 15091 mRNA_6723 0.18 -0.8
1,542,543 + 15091 mRNA_6723 0.25 -0.7
1,542,792 - 15091 mRNA_6723 0.38 1.5
1,542,795 + 15091 mRNA_6723 0.38 -0.4
1,542,849 - 15091 mRNA_6723 0.40 -0.4
1,542,891 + 15091 mRNA_6723 0.42 -0.7
1,542,999 + 15091 mRNA_6723 0.48 -1.0
1,542,999 + 15091 mRNA_6723 0.48 0.1
1,543,118 - 15091 mRNA_6723 0.54 0.2
1,543,197 + 15091 mRNA_6723 0.57 -0.1
1,543,279 - 15091 mRNA_6723 0.61 -2.3
1,543,307 - 15091 mRNA_6723 0.63 -0.4
1,543,366 + 15091 mRNA_6723 0.66 0.5
1,543,368 + 15091 mRNA_6723 0.66 -0.5
1,543,540 + 15091 mRNA_6723 0.74 1.0
1,543,549 - 15091 mRNA_6723 0.75 -1.5
1,543,567 - 15091 mRNA_6723 0.76 0.7
1,543,689 - 15091 mRNA_6723 0.82 -0.3
1,543,740 - 15091 mRNA_6723 0.84 2.2
1,543,741 - 15091 mRNA_6723 0.84 -0.7
1,543,935 - 0.0
1,544,021 - -0.1
1,544,173 - -0.7
1,544,191 - 0.3
1,544,199 + -0.8
1,544,246 - -1.7
1,544,298 - 1.2
1,544,307 - -1.9
1,544,311 - -2.0
1,544,314 - -0.6
1,544,329 - -0.9
1,544,361 - -0.7
1,544,418 + 15092 mRNA_6724 0.11 -1.7
1,544,421 - 15092 mRNA_6724 0.11 -1.2
1,544,427 + 15092 mRNA_6724 0.11 -0.3
1,544,439 - 15092 mRNA_6724 0.12 1.2
1,544,454 - 15092 mRNA_6724 0.13 -0.5
1,544,468 - 15092 mRNA_6724 0.13 0.0
1,544,488 - 15092 mRNA_6724 0.14 -0.2
1,544,493 + 15092 mRNA_6724 0.14 2.1
1,544,498 - 15092 mRNA_6724 0.14 1.4
1,544,584 - 15092 mRNA_6724 0.18 -0.3
1,544,685 + 15092 mRNA_6724 0.22 1.5
1,544,689 - 15092 mRNA_6724 0.22 0.0
1,544,696 - 15092 mRNA_6724 0.23 0.3
1,544,836 - 15092 mRNA_6724 0.29 -0.1
1,544,852 - 15092 mRNA_6724 0.29 -0.0
1,544,889 + 15092 mRNA_6724 0.31 -0.8
1,544,893 - 15092 mRNA_6724 0.31 -1.7
1,544,919 + 15092 mRNA_6724 0.32 -1.4
1,544,924 - 15092 mRNA_6724 0.32 -0.8
1,544,986 - 15092 mRNA_6724 0.35 0.2
1,545,057 - 15092 mRNA_6724 0.38 -1.4