Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6646

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6645: 15013 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 1335554 to 1337313 15013 mRNA_6646: 15014 - K14647 vpr minor extracellular serine protease Vpr, at 1337672 to 1341391 15014 mRNA_6647: 15015 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 1341651 to 1342937 15015

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,337,066 - 15013 mRNA_6645 0.86 -1.0
1,337,100 + 15013 mRNA_6645 0.88 0.7
1,337,179 + -0.2
1,337,225 + -3.3
1,337,500 + -1.9
1,337,509 + 0.8
1,337,545 - -0.9
1,337,553 + -0.1
1,337,636 + -0.0
1,337,812 + 0.8
1,337,954 + 0.6
1,338,256 - 15014 mRNA_6646 0.16 -2.3
1,338,515 + 15014 mRNA_6646 0.23 0.8
1,338,553 + 15014 mRNA_6646 0.24 -0.1
1,338,565 - 15014 mRNA_6646 0.24 -0.1
1,338,750 + 15014 mRNA_6646 0.29 0.3
1,338,829 - 15014 mRNA_6646 0.31 -0.5
1,338,963 - 15014 mRNA_6646 0.35 0.0
1,339,109 + 15014 mRNA_6646 0.39 -0.4
1,339,575 - 15014 mRNA_6646 0.51 0.2
1,339,707 + 15014 mRNA_6646 0.55 0.5
1,339,709 + 15014 mRNA_6646 0.55 0.8
1,339,742 - 15014 mRNA_6646 0.56 -2.1
1,339,853 - 15014 mRNA_6646 0.59 -4.0
1,339,856 - 15014 mRNA_6646 0.59 1.4
1,339,887 + 15014 mRNA_6646 0.60 1.6
1,340,154 + 15014 mRNA_6646 0.67 -0.0
1,340,197 + 15014 mRNA_6646 0.68 1.5
1,340,301 + 15014 mRNA_6646 0.71 -0.9
1,340,312 + 15014 mRNA_6646 0.71 0.1
1,340,320 - 15014 mRNA_6646 0.71 -0.5
1,340,638 - 15014 mRNA_6646 0.80 -2.0
1,340,643 - 15014 mRNA_6646 0.80 -0.4
1,340,700 - 15014 mRNA_6646 0.81 -0.5
1,340,708 + 15014 mRNA_6646 0.82 -2.4
1,341,045 - 0.2
1,341,216 + -0.3
1,341,343 - 1.6
1,341,354 + 0.0
1,341,489 + 1.3
1,341,491 + -0.0
1,341,502 + -0.1
1,341,528 - -2.6
1,341,530 - -1.4
1,341,559 - -1.6
1,341,583 + -0.3
1,341,611 - -0.5
1,341,616 + 0.4
1,341,618 + -1.4
1,341,655 - 2.1
1,341,763 + 0.3
1,341,785 - 15015 mRNA_6647 0.10 -3.0
1,341,819 - 15015 mRNA_6647 0.13 -1.0
1,341,934 + 15015 mRNA_6647 0.22 0.4
1,342,200 - 15015 mRNA_6647 0.43 -0.0