Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6561

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6560: 14928 - Hypothetical Protein, at 1095420 to 1097567 14928 mRNA_6561: 14929 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1097755 to 1099041 14929 mRNA_6562: 14930 - K20353 SEC16 COPII coat assembly protein SEC16, at 1099202 to 1104647 14930

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,097,863 - 0.6
1,097,989 - 14929 mRNA_6561 0.18 -0.8
1,097,995 + 14929 mRNA_6561 0.19 0.0
1,097,999 - 14929 mRNA_6561 0.19 -0.3
1,098,136 + 14929 mRNA_6561 0.30 0.5
1,098,279 + 14929 mRNA_6561 0.41 0.4
1,098,289 - 14929 mRNA_6561 0.41 -1.3
1,098,318 + 14929 mRNA_6561 0.44 -0.9
1,098,322 + 14929 mRNA_6561 0.44 -0.3
1,098,455 - 14929 mRNA_6561 0.54 1.4
1,098,603 - 14929 mRNA_6561 0.66 0.3
1,098,608 + 14929 mRNA_6561 0.66 0.0
1,099,150 + -2.2
1,099,167 - 3.5
1,099,250 + -2.7