Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6469

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6468: 14836 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 853896 to 857931 14836 mRNA_6469: 14837 - K10625 UBR1 E3 ubiquitin-protein ligase UBR1, at 858043 to 864348 14837 mRNA_6470: 14838 - Hypothetical Protein, at 864745 to 865870 14838

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
857,804 + -3.0
857,872 + -0.5
857,900 + -0.1
858,041 + -1.2
858,150 - -2.0
860,303 - 14837 mRNA_6469 0.36 -0.1
861,323 - 14837 mRNA_6469 0.52 -2.2
861,728 + 14837 mRNA_6469 0.58 -2.7
862,446 + 14837 mRNA_6469 0.70 -0.4
862,563 - 14837 mRNA_6469 0.72 -0.4
863,932 - -2.0
863,938 - 0.2
864,093 - -1.3
864,093 - -0.7
864,182 + -1.2
864,385 - 1.8
864,401 + 0.8
864,685 + 0.5
864,793 + -0.2
864,842 + -1.9
864,869 - 14838 mRNA_6470 0.11 0.1
864,977 + 14838 mRNA_6470 0.21 0.8
864,979 + 14838 mRNA_6470 0.21 -2.9
864,986 - 14838 mRNA_6470 0.21 0.2
865,031 + 14838 mRNA_6470 0.25 -1.3
865,139 + 14838 mRNA_6470 0.35 0.6
865,170 + 14838 mRNA_6470 0.38 -1.0
865,302 - 14838 mRNA_6470 0.49 -1.5