Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6393

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6392: 14760 - KOG4533 Uncharacterized conserved protein, at 704609 to 706220 14760 mRNA_6393: 14761 - KOG3823 Uncharacterized conserved protein, at 706440 to 709966 14761 mRNA_6394: 14762 - HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235, at 710467 to 712891 14762

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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705,728 + 14760 mRNA_6392 0.69 0.4
705,887 + 14760 mRNA_6392 0.79 0.4
705,901 - 14760 mRNA_6392 0.80 0.8
705,904 + 14760 mRNA_6392 0.80 -0.7
705,908 - 14760 mRNA_6392 0.81 0.1
705,950 + 14760 mRNA_6392 0.83 -1.0
706,022 + 14760 mRNA_6392 0.88 -0.2
706,073 - -2.0
706,116 + -1.4
706,224 + 0.0
706,348 - -0.3
706,349 - -1.3
706,354 - -0.8
706,366 + -1.8
706,375 - -0.2
706,380 - -1.0
706,381 + -0.3
706,381 + -1.0
706,383 + 0.6
706,392 + -0.5
706,417 - 0.7
706,434 + -0.3
706,676 + 0.8
706,683 + -0.9
706,961 + 14761 mRNA_6393 0.15 0.8
706,963 - 14761 mRNA_6393 0.15 -1.3
706,965 + 14761 mRNA_6393 0.15 -1.3
707,098 + 14761 mRNA_6393 0.19 0.3
707,394 - 14761 mRNA_6393 0.27 0.2
707,398 + 14761 mRNA_6393 0.27 -0.0
707,483 + 14761 mRNA_6393 0.30 -0.0
707,549 - 14761 mRNA_6393 0.31 0.6
707,847 - 14761 mRNA_6393 0.40 -0.8
708,018 - 14761 mRNA_6393 0.45 0.3
708,136 - 14761 mRNA_6393 0.48 0.7
708,308 + 14761 mRNA_6393 0.53 -0.1
708,405 + 14761 mRNA_6393 0.56 0.2
708,405 + 14761 mRNA_6393 0.56 2.0
708,479 + 14761 mRNA_6393 0.58 -1.3
708,602 + 14761 mRNA_6393 0.61 -0.0
708,680 - 14761 mRNA_6393 0.64 -1.4
708,704 + 14761 mRNA_6393 0.64 -1.8
709,159 - 14761 mRNA_6393 0.77 -1.9
709,167 + 14761 mRNA_6393 0.77 0.8
709,491 - 14761 mRNA_6393 0.87 -0.0
709,496 + 14761 mRNA_6393 0.87 0.1
709,776 + -0.8
709,800 - 0.4
710,025 - -2.9
710,148 - -0.4
710,178 - -1.1
710,178 + -1.1
710,189 - -1.4
710,201 + -0.2
710,231 - 0.8
710,373 + 0.4
710,504 - -0.5
710,608 - 1.2
710,633 + -0.5
710,635 + 0.2
710,640 - -0.2
710,738 + 14762 mRNA_6394 0.11 1.4
710,800 - 14762 mRNA_6394 0.14 0.9
710,854 + 14762 mRNA_6394 0.16 -2.3
710,921 - 14762 mRNA_6394 0.19 -0.4
710,922 + 14762 mRNA_6394 0.19 0.3
710,933 + 14762 mRNA_6394 0.19 -0.2
710,934 - 14762 mRNA_6394 0.19 -1.9