Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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39 + -0.5
39 + 1.6
40 + -2.2
40 + -1.5
40 + 0.0
41 + 0.7
56 + -0.4
56 + -1.6
56 + -0.6
58 + 2.1
59 + -0.7
59 + -3.1
62 - 0.0
65 - 0.2
77 + -0.4
84 + 0.5
102 + -5.1
137 + -1.7
151 + -0.7
200 + -0.3
208 + -0.5
216 + -1.2
229 + -1.3
348 - -1.2
430 + 0.7
498 - -1.3
502 - -2.0
685 + 14474 mRNA_6106 0.13 -0.3
747 + 14474 mRNA_6106 0.15 0.9
755 + 14474 mRNA_6106 0.15 -1.1
946 + 14474 mRNA_6106 0.21 -0.9
975 + 14474 mRNA_6106 0.22 -2.3
1,245 + 14474 mRNA_6106 0.30 -0.3
2,125 + 14474 mRNA_6106 0.55 -1.5
2,839 - 14474 mRNA_6106 0.76 -0.4
3,125 - 14474 mRNA_6106 0.84 -1.5
3,248 - 14474 mRNA_6106 0.88 -2.5
3,570 + -2.6
3,665 + -0.8
3,692 + -1.5
3,706 + -0.9
3,726 + 0.2
3,820 + -2.0
3,853 + -0.6
3,859 + -1.0
3,909 - -1.0
3,929 - -2.0