Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5978

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121 14345 mRNA_5978: 14346 - Hypothetical Protein, at 1367846 to 1369331 14346 mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1369573 to 1370035 14347 mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1370321 to 1371409 14348

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,366,892 - 14345 mRNA_5977 0.88 -0.3
1,366,896 - 14345 mRNA_5977 0.88 -1.9
1,367,055 - -0.2
1,367,262 + 0.9
1,367,345 - -1.5
1,367,347 - 0.5
1,367,348 - -0.5
1,367,356 + -1.6
1,367,358 - -0.5
1,367,374 + -0.6
1,367,374 + 1.2
1,367,374 + 0.3
1,367,374 - 0.1
1,367,448 + -0.7
1,368,093 + 14346 mRNA_5978 0.17 1.4
1,368,254 + 14346 mRNA_5978 0.27 0.8
1,370,230 - -1.2