Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5951

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5950: 14318 - KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain, at 1310261 to 1312291 14318 mRNA_5951: 14319 - HMMPfam-Peptidase of plants and bacteria-PF04450, at 1312489 to 1313415 14319 mRNA_5952: 14320 - K15198 BDP1, TFC5 transcription factor TFIIIB component B'', at 1313767 to 1316568 14320

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,311,533 + 14318 mRNA_5950 0.63 -2.6
1,311,635 + 14318 mRNA_5950 0.68 -0.4
1,311,829 + 14318 mRNA_5950 0.77 0.6
1,312,044 - 14318 mRNA_5950 0.88 0.5
1,312,054 + 14318 mRNA_5950 0.88 0.4
1,312,113 + -0.4
1,312,130 + -2.0
1,312,401 + -1.7
1,312,429 + -2.1
1,312,434 + 1.2
1,312,615 - 14319 mRNA_5951 0.14 1.4
1,312,701 - 14319 mRNA_5951 0.23 -0.4
1,312,708 - 14319 mRNA_5951 0.24 0.2
1,312,729 - 14319 mRNA_5951 0.26 1.2
1,312,762 + 14319 mRNA_5951 0.29 -1.3
1,312,810 + 14319 mRNA_5951 0.35 0.8
1,312,852 + 14319 mRNA_5951 0.39 -1.6
1,313,047 - 14319 mRNA_5951 0.60 -1.4
1,313,129 + 14319 mRNA_5951 0.69 1.9
1,313,423 - 0.2
1,313,609 + -1.0
1,313,730 - -0.2