Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5834

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5833: 14201 - K09705 K09705 uncharacterized protein, at 1047761 to 1048668 14201 mRNA_5834: 14202 - HMMPfam-Protein of unknown function (DUF1688)-PF07958, at 1048946 to 1050486 14202 mRNA_5836: 14204 - Hypothetical Protein, at 1051031 to 1051324 14204 mRNA_5835: 14203 - Hypothetical Protein, at 1051444 to 1053111 14203

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,048,201 - 14201 mRNA_5833 0.48 -1.1
1,048,396 + 14201 mRNA_5833 0.70 -2.6
1,048,429 - 14201 mRNA_5833 0.74 -2.7
1,048,431 + 14201 mRNA_5833 0.74 1.6
1,048,442 + 14201 mRNA_5833 0.75 0.4
1,048,512 + 14201 mRNA_5833 0.83 1.7
1,048,537 - 14201 mRNA_5833 0.85 -2.2
1,048,539 + 14201 mRNA_5833 0.86 -1.2
1,048,554 - 14201 mRNA_5833 0.87 -1.2
1,048,739 + -2.3
1,048,748 + -0.1
1,048,774 - -0.5
1,048,875 - 0.6
1,048,943 - -1.4
1,048,995 - 0.9
1,049,020 - 1.1
1,049,027 + -0.3
1,049,034 + 0.6
1,049,466 - 14202 mRNA_5834 0.34 1.0
1,050,115 - 14202 mRNA_5834 0.76 -0.6
1,050,194 - 14202 mRNA_5834 0.81 -0.4
1,050,197 + 14202 mRNA_5834 0.81 0.5
1,050,429 + -0.2
1,050,472 + -1.1
1,050,499 + -1.4
1,050,793 + -0.0
1,050,802 + -1.2
1,050,927 + -0.5
1,050,960 - 0.2
1,050,971 + -0.5
1,050,971 + 0.7
1,050,971 + 0.3
1,050,972 - -0.3
1,050,989 + -0.3
1,051,248 - 14204 mRNA_5836 0.74 -1.2
1,051,253 - 14204 mRNA_5836 0.76 0.1