Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5653

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5652: 14020 - KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development, at 602133 to 602528 14020 mRNA_5653: 14021 - Hypothetical Protein, at 603450 to 604586 14021 mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605186 to 607588 14022

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
602,582 - -0.1
602,618 + -0.3
603,372 + -1.6
603,609 + 14021 mRNA_5653 0.14 -2.7
603,714 + 14021 mRNA_5653 0.23 0.8
603,834 + 14021 mRNA_5653 0.34 0.6
603,992 + 14021 mRNA_5653 0.48 -0.1
603,997 + 14021 mRNA_5653 0.48 -1.0
604,075 - 14021 mRNA_5653 0.55 1.2
604,398 + 14021 mRNA_5653 0.83 -1.5
604,546 - 0.9
604,660 - -0.2
604,709 - -1.6
604,809 + 0.1
604,811 + 0.5
604,813 - -1.5
604,850 - 0.8
604,891 - -0.2
604,893 + -0.4
604,897 - -0.6
604,900 + -0.9
604,915 + -0.8
604,916 + -2.3
604,928 - 0.1
604,928 - 1.4
604,928 - -1.2
604,934 - 1.9
604,945 - -0.1
604,987 - -0.7
604,988 - 1.5
605,001 + -0.5
605,005 - -2.9
605,005 + -0.6
605,178 - 0.1
605,456 + 14022 mRNA_5654 0.11 -0.1
605,569 + 14022 mRNA_5654 0.16 -2.2