Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5573

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405680 to 409565 13940 mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409933 to 411114 13941

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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409,527 + 0.0
409,575 - -2.8
409,590 + 0.8
409,598 - 0.6
409,614 + -0.6
409,614 + -2.0
409,617 - 0.0
409,624 + 1.3
409,670 - 0.8
409,696 - -3.0
409,717 - 0.2
409,730 + 0.2
409,755 - -0.1
409,834 - 0.6
409,863 - -1.3
409,939 + -0.3
410,023 + 1.0
410,040 + -1.1
410,115 + 13941 mRNA_5573 0.15 -0.2
410,306 + 13941 mRNA_5573 0.32 -1.3
410,323 + 13941 mRNA_5573 0.33 1.4
410,562 + 13941 mRNA_5573 0.53 -1.6
410,580 + 13941 mRNA_5573 0.55 0.2
410,769 + 13941 mRNA_5573 0.71 -1.4
410,799 + 13941 mRNA_5573 0.73 1.0
410,808 + 13941 mRNA_5573 0.74 1.0
410,828 - 13941 mRNA_5573 0.76 0.2
410,852 - 13941 mRNA_5573 0.78 1.7
410,865 + 13941 mRNA_5573 0.79 -1.1
410,988 + 13941 mRNA_5573 0.89 -2.0
411,001 - 0.1
411,007 + 0.5
411,010 + -0.7
411,036 + 0.5
411,059 - 0.3
411,130 - -1.7
411,136 + 0.8
411,149 - 1.5
411,173 - -0.1
411,180 + 0.1
411,185 + -2.8
411,198 + -0.8
411,198 + -0.4
411,220 - -0.7
411,264 - 0.3
411,269 + 0.6
411,271 + 2.5
411,282 + -1.7
411,288 - 0.8
411,293 + 0.7
411,296 - -0.3
411,307 + 0.4
411,310 - 0.4
411,311 - -0.9
411,312 + 1.1
411,315 + -2.6
411,316 - -0.2
411,317 + -3.0
411,317 + 0.0
411,318 + -0.4
411,319 - 0.4
411,319 + 0.6
411,322 - -0.2
411,328 - -3.0
411,337 - -1.4
411,337 + -1.0
411,338 + 0.2
411,345 - -1.4
411,364 - 1.4
411,368 - -2.1
411,374 - -1.0
411,383 - -0.9
411,388 - -0.3
411,395 + -0.4
411,412 + -0.2
411,416 + -1.4
411,424 - 2.2
411,427 - -0.1
411,433 + -2.5
411,438 - 1.6
411,449 - -0.3
411,453 + -1.8
411,455 - -0.7
411,458 - -3.3
411,465 - -2.2
411,466 - -0.2
411,475 + -1.7
411,482 + 1.0
411,489 - -0.3
411,496 - -2.5
411,503 + -2.7
411,504 - -0.2
411,524 - -3.1
411,531 + -1.0
411,541 - -2.6
411,555 - -1.0
411,569 + 0.2
411,570 - -0.4
411,588 - 1.2
411,600 - -0.3
411,619 + 1.1
411,621 - -0.1
411,646 - 0.4
411,651 - 0.2
411,652 - -0.3
411,652 - 1.2
411,657 + -1.0
411,659 + 1.7
411,659 - -1.4
411,661 - -1.4
411,662 - -1.7
411,663 - -1.3
411,663 - 1.0
411,663 + 1.4
411,666 + -0.8
411,672 + 0.0
411,679 + 1.0
411,683 - -0.6
411,684 + 0.5
411,685 + 0.3
411,685 + -2.0
411,685 - 0.3
411,687 - 0.4
411,690 + -0.2
411,692 + -0.1
411,693 + 0.7
411,697 - 0.0
411,702 + -0.6
411,702 - 1.0
411,703 + -1.6
411,707 + 0.3
411,707 + 0.2
411,711 + -1.3
411,715 + -2.2
411,716 + -1.2
411,723 + -1.7
411,727 - 1.2
411,727 + -1.2
411,729 - -0.4
411,742 - -1.0
411,746 - -0.2
411,751 - 1.5
411,754 - -3.1
411,755 + -0.3
411,756 + 0.1
411,761 + -1.0
411,765 - -0.9
411,773 - 0.6
411,774 + -2.8
411,774 + 0.4
411,775 + 0.1
411,775 + -2.4
411,776 + -0.1
411,776 - 0.1
411,781 - -0.8
411,784 + -1.0
411,785 - 0.2
411,788 - 0.4
411,789 - 0.6
411,795 + -1.1
411,795 - 1.2
411,799 + -0.2
411,799 + -2.0
411,801 - 0.2
411,802 - -1.0
411,802 - -0.3
411,815 - 0.6
411,822 - -0.4
411,826 + 0.1
411,831 + -0.1
411,876 + -0.7
411,932 - -2.1
411,948 - 0.7
411,955 + -2.2
411,959 - -1.7
411,959 + 0.7
411,979 + -0.2
411,980 + -1.2
411,985 - 0.5
411,987 + -0.7
411,989 + 0.6
412,064 + -1.7
412,097 + -0.3
412,097 - 1.0