Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5565

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5565: 13933 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 391659 to 392676 13933 mRNA_5566: 13934 - Hypothetical Protein, at 393012 to 395471 13934

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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390,768 - -0.9
391,031 + -1.3
391,042 - 2.4
391,195 + 1.1
391,195 + 0.1
391,305 + -0.3
391,306 + -0.4
391,319 - 0.2
391,326 + -1.1
391,328 - -0.1
391,343 - 0.2
391,381 - -0.3
391,401 + -2.1
391,401 + -0.3
391,419 - -1.3
391,420 - -0.6
391,438 + -0.5
391,447 - -0.0
391,454 - 0.1
391,454 - -1.3
391,465 + 0.2
391,472 - -0.6
391,484 + 1.7
391,488 - -1.0
391,498 + -2.2
391,505 - -0.5
391,508 + 2.7
391,622 - 0.2
391,634 - 0.7
391,635 - 0.0
391,653 - -0.4
391,947 - 13933 mRNA_5565 0.28 0.4
391,953 + 13933 mRNA_5565 0.29 -0.2
392,023 - 13933 mRNA_5565 0.36 0.7
392,057 - 13933 mRNA_5565 0.39 -2.3
392,071 - 13933 mRNA_5565 0.40 -1.0
392,497 + 13933 mRNA_5565 0.82 -0.6
392,511 + 13933 mRNA_5565 0.84 -1.5
392,629 - 0.6
392,941 + 1.1
393,064 + -0.4
393,082 - -0.1
393,222 - -0.8
393,224 + -0.7
393,242 - -0.2
393,386 + 13934 mRNA_5566 0.15 -0.1
393,442 - 13934 mRNA_5566 0.17 0.3