Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5451

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5451: 13819 - Hypothetical Protein, at 122441 to 123785 13819 mRNA_5452: 13820 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 124272 to 125754 13820

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
121,539 - -2.0
121,770 - 0.9
121,785 + -1.3
121,938 + 0.3
122,078 - -1.8
122,080 + 0.2
122,093 - 1.0
122,096 - 0.6
122,116 - 0.1
122,671 + 13819 mRNA_5451 0.17 -0.1
122,692 + 13819 mRNA_5451 0.19 0.5
123,123 + 13819 mRNA_5451 0.51 -0.5
123,227 + 13819 mRNA_5451 0.58 -0.2
123,251 - 13819 mRNA_5451 0.60 0.0
123,309 - 13819 mRNA_5451 0.65 1.2
123,346 + 13819 mRNA_5451 0.67 0.8
123,348 + 13819 mRNA_5451 0.67 0.8
123,370 - 13819 mRNA_5451 0.69 1.6
123,379 - 13819 mRNA_5451 0.70 -0.9
123,385 - 13819 mRNA_5451 0.70 0.7
123,400 - 13819 mRNA_5451 0.71 -2.3
123,518 + 13819 mRNA_5451 0.80 0.2
123,522 + 13819 mRNA_5451 0.80 0.1
123,525 + 13819 mRNA_5451 0.81 1.8
123,533 + 13819 mRNA_5451 0.81 -0.6
123,534 + 13819 mRNA_5451 0.81 -2.4
123,535 + 13819 mRNA_5451 0.81 -1.2
123,538 - 13819 mRNA_5451 0.82 -0.2
123,545 + 13819 mRNA_5451 0.82 -0.7
123,549 - 13819 mRNA_5451 0.82 -0.0
123,559 + 13819 mRNA_5451 0.83 -0.5
123,566 - 13819 mRNA_5451 0.84 0.9
123,579 - 13819 mRNA_5451 0.85 0.1
123,597 - 13819 mRNA_5451 0.86 -0.2
123,626 - 13819 mRNA_5451 0.88 0.9
123,673 - 0.5
123,674 - 0.0
123,675 + 0.4
123,677 + -0.4
123,678 + -2.1
123,681 - -0.8
123,691 + -0.0
123,703 + -1.1
123,716 - 0.2
123,774 + -0.4
123,813 - -0.4
123,827 - 0.2
123,834 + -1.2
123,836 - 1.9
123,836 - -1.1
123,841 + -0.6
123,857 + -2.6
123,862 + 1.0
123,864 + -1.1
123,869 - -1.2
123,877 + 0.3
123,879 + -2.8
123,884 - 0.5
123,929 + 1.0
123,931 + -1.6
123,943 - -2.8
123,948 + 0.3
123,978 + 0.8
123,978 + -0.4
123,981 - 0.6
123,992 + 0.6
123,995 + -1.3
124,018 - 0.1
124,033 - 0.1
124,052 + 0.2
124,106 - 0.9
124,114 - -1.9
124,115 - 0.9
124,118 + -0.5
124,120 + -0.4
124,122 + -1.1
124,124 - -1.8
124,127 - -0.9
124,129 + -0.4
124,132 - -1.7
124,133 - -1.6
124,133 - 0.5
124,134 - 0.3
124,134 - -0.3
124,136 - -2.0
124,136 - -0.4
124,138 + 2.1
124,142 - -0.5
124,143 - 1.1
124,144 + 0.4
124,144 + -1.1
124,145 + 0.3
124,145 - -1.7
124,146 + 0.1
124,151 - 2.1
124,151 - 0.7
124,152 - -1.0
124,152 + -2.3
124,155 + -0.1
124,162 - 0.8
124,165 - -1.8
124,165 - -2.1
124,183 + 0.5
124,202 + 0.8
124,204 + -0.9
124,244 + 0.4
124,303 + 1.1
124,311 - -0.4
124,347 + 1.6
124,397 - -0.0
124,416 + -0.3
124,441 + 13820 mRNA_5452 0.11 -0.9
124,462 + 13820 mRNA_5452 0.13 -0.1
124,489 + 13820 mRNA_5452 0.15 -0.9
124,494 - 13820 mRNA_5452 0.15 -0.2
124,629 + 13820 mRNA_5452 0.24 -0.6
124,631 + 13820 mRNA_5452 0.24 -1.5
124,637 - 13820 mRNA_5452 0.25 -0.9