Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5235

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224900 to 226337 13602 mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226852 to 231804 13603 mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232008 to 233871 13604

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
226,489 - -0.3
226,506 + 0.6
226,520 - -0.7
226,544 + -1.1
226,576 + -1.5
226,578 + -0.3
226,579 - 0.6
226,656 + -0.7
226,662 - -2.8
226,666 - -0.9
226,757 - 2.3
226,767 - 0.5
226,784 - -1.0
226,785 - -0.2
226,805 - -1.1
226,913 + -1.4
227,077 + -0.5
227,103 + -0.9
227,225 + -2.6
227,388 - 13603 mRNA_5235 0.11 -1.1
227,531 + 13603 mRNA_5235 0.14 -1.8
227,558 + 13603 mRNA_5235 0.14 0.5
227,675 - 13603 mRNA_5235 0.17 -1.1
228,241 - 13603 mRNA_5235 0.28 -0.9
228,267 + 13603 mRNA_5235 0.29 -0.1
228,288 + 13603 mRNA_5235 0.29 0.4
228,594 + 13603 mRNA_5235 0.35 -1.8
228,673 - 13603 mRNA_5235 0.37 -1.6
229,118 + 13603 mRNA_5235 0.46 -0.5
229,147 + 13603 mRNA_5235 0.46 0.0
229,392 - 13603 mRNA_5235 0.51 2.3
229,730 + 13603 mRNA_5235 0.58 -1.4
229,989 + 13603 mRNA_5235 0.63 -1.3
230,309 + 13603 mRNA_5235 0.70 0.1
230,431 - 13603 mRNA_5235 0.72 -0.1
230,569 - 13603 mRNA_5235 0.75 -0.1
231,026 + 13603 mRNA_5235 0.84 0.0
231,028 - 13603 mRNA_5235 0.84 0.0
231,292 + 13603 mRNA_5235 0.90 1.2
231,329 + -0.2
231,401 + -0.3
231,730 + 1.7
231,736 + -2.8
231,862 + -2.3
231,863 + 0.5
231,869 - -3.4
231,876 - 0.6
231,894 - -0.1
232,012 - 1.0
232,185 - -0.9
232,190 + -2.2
232,200 - 13604 mRNA_5236 0.10 -0.3
232,635 - 13604 mRNA_5236 0.34 1.1
232,646 + 13604 mRNA_5236 0.34 0.6
232,776 - 13604 mRNA_5236 0.41 -2.4