Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5003

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5002: 13370 - K02981 RP-S2e, RPS2 small subunit ribosomal protein S2e, at 1513605 to 1514626 13370 mRNA_5003: 13371 - Hypothetical Protein, at 1515241 to 1515824 13371 mRNA_5004: 13372 - K12848 SNU23 U4/U6.U5 tri-snRNP component SNU23, at 1516047 to 1517117 13372

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,514,800 - 0.6
1,514,811 + -0.4
1,514,829 + -0.3
1,514,941 - -1.6
1,514,958 - 1.5
1,514,959 + 0.4
1,514,988 - -0.9
1,514,988 - -0.5
1,515,124 + -2.5
1,515,125 + -0.3
1,515,149 - -3.1
1,515,156 - -0.8
1,515,173 + -0.3
1,515,175 + 0.4
1,515,175 - -0.0
1,515,181 + -0.0
1,515,182 + -0.3
1,515,205 - 0.2
1,515,206 - -1.1
1,515,267 + -0.4
1,515,306 + 13371 mRNA_5003 0.11 -0.5
1,515,364 + 13371 mRNA_5003 0.21 0.7
1,515,530 - 13371 mRNA_5003 0.49 -1.7
1,515,553 - 13371 mRNA_5003 0.53 0.6
1,515,626 + 13371 mRNA_5003 0.66 0.6
1,515,626 + 13371 mRNA_5003 0.66 -0.8
1,515,766 - -2.4
1,515,774 - 0.3
1,515,784 + -0.9
1,515,787 - -0.3
1,515,803 + 0.8
1,515,823 - 0.2
1,515,841 - -2.3
1,515,867 - -1.6
1,515,887 + -0.6
1,515,949 - 0.1
1,516,042 + 0.7
1,516,049 - 0.1