Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4717

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4717: 13085 - BLAST putative proteasome regulatory subunit 12 [Rhizoctoni..., at 844086 to 846101 13085 mRNA_4718: 13086 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSitePatterns-Thaumatin family signature.-PS00316,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 846943 to 849026 13086

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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843,134 - -0.1
843,245 + -0.5
843,258 + 0.5
843,374 - 0.0
843,400 + 1.2
843,408 + -2.0
843,413 + -0.7
843,553 - -0.3
843,572 + 0.8
843,584 - -0.4
843,676 - -0.2
843,708 + -2.1
843,979 + -1.8
844,109 - -0.8
844,159 + 0.2
844,300 + 13085 mRNA_4717 0.11 0.0
844,403 - 13085 mRNA_4717 0.16 -1.1
844,428 + 13085 mRNA_4717 0.17 -0.1
844,477 + 13085 mRNA_4717 0.19 -0.8
844,608 + 13085 mRNA_4717 0.26 -1.3
845,186 - 13085 mRNA_4717 0.55 0.7
845,460 - 13085 mRNA_4717 0.68 1.5
845,470 - 13085 mRNA_4717 0.69 -0.8
845,653 + 13085 mRNA_4717 0.78 1.4
845,756 + 13085 mRNA_4717 0.83 0.3
845,760 - 13085 mRNA_4717 0.83 1.2
845,781 + 13085 mRNA_4717 0.84 -4.7
845,888 + 13085 mRNA_4717 0.89 -2.0
846,034 + -2.5
846,037 - -1.5
846,048 + -0.6
846,250 - -0.8
846,365 - 1.1
846,479 - 1.5
846,495 + -2.3
846,513 + -2.5
846,598 - -0.8
846,617 + -0.1
846,627 - 0.4
846,630 - 0.2
846,645 + 0.2
846,649 + 0.3
846,660 + 0.2
846,782 - 1.7
846,785 - 0.4
846,794 - -3.3
846,812 - 0.9
846,919 - 0.8
847,070 - -0.6
847,094 - -0.3