Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4591

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4590: 12958 - Hypothetical Protein, at 537053 to 538336 12958 mRNA_4591: 12959 - KOG0379 Kelch repeat-containing proteins, at 538604 to 541004 12959 mRNA_4592: 12960 - K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A, at 541515 to 545296 12960

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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537,789 - 12958 mRNA_4590 0.57 1.1
537,804 - 12958 mRNA_4590 0.58 0.1
537,809 + 12958 mRNA_4590 0.59 0.5
537,817 + 12958 mRNA_4590 0.60 -0.3
537,933 - 12958 mRNA_4590 0.69 -2.5
538,220 - 1.0
538,531 + -0.1
538,661 + -2.6
538,666 + 0.9
538,682 - -1.1
538,821 + -0.2
539,127 + 12959 mRNA_4591 0.22 -2.2
539,558 - 12959 mRNA_4591 0.40 -0.0
539,820 - 12959 mRNA_4591 0.51 -0.4
539,848 + 12959 mRNA_4591 0.52 1.3
540,023 + 12959 mRNA_4591 0.59 -0.7
540,135 - 12959 mRNA_4591 0.64 0.9
540,136 - 12959 mRNA_4591 0.64 -0.3
540,406 - 12959 mRNA_4591 0.75 -1.7
540,593 - 12959 mRNA_4591 0.83 -0.0
540,609 + 12959 mRNA_4591 0.84 0.3
540,707 - 12959 mRNA_4591 0.88 -1.1
540,881 - -0.8
541,009 - 0.0
541,017 + -0.1
541,029 + -0.3
541,171 - 0.6
541,174 - -3.1
541,175 - -0.5
541,186 - 0.5
541,194 - 0.1
541,198 - 1.7
541,200 + 0.7
541,312 + -4.4
541,317 + -0.4
541,377 + -2.4
541,386 - 0.1
541,394 - -0.3
541,544 + -2.9
541,548 + -0.9