Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4435

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4434: 12802 - Hypothetical Protein, at 173959 to 175087 12802 mRNA_4435: 12803 - KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains, at 175416 to 177921 12803 mRNA_4436: 12804 - Hypothetical Protein, at 178306 to 178939 12804

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
174,703 + 12802 mRNA_4434 0.66 -1.1
174,773 - 12802 mRNA_4434 0.72 0.0
174,907 - 12802 mRNA_4434 0.84 -1.3
174,915 + 12802 mRNA_4434 0.85 -0.2
174,941 - 12802 mRNA_4434 0.87 0.5
174,947 + 12802 mRNA_4434 0.88 0.4
175,090 + -2.7
175,090 - -1.0
175,218 + -0.3
175,223 + 2.5
175,390 + -2.4
175,485 + -1.4
175,544 - 0.2
175,554 + 0.6
175,667 - 12803 mRNA_4435 0.10 0.6
175,815 + 12803 mRNA_4435 0.16 -0.6
175,945 + 12803 mRNA_4435 0.21 0.1
176,517 + 12803 mRNA_4435 0.44 0.2
176,528 + 12803 mRNA_4435 0.44 -1.2
176,801 - 12803 mRNA_4435 0.55 -0.7
176,934 - 12803 mRNA_4435 0.61 -0.3
177,166 + 12803 mRNA_4435 0.70 0.3
177,346 - 12803 mRNA_4435 0.77 0.8
177,376 - 12803 mRNA_4435 0.78 1.5
177,421 - 12803 mRNA_4435 0.80 1.0
177,436 + 12803 mRNA_4435 0.81 0.2
177,454 + 12803 mRNA_4435 0.81 0.2
177,684 - -0.5
177,735 + 1.3
177,743 + 0.4
178,129 + 1.9
178,180 - -0.4
178,275 + -2.0
178,278 - -0.9
178,309 - 1.5
178,315 - -1.1
178,320 - 0.2
178,320 - -1.1
178,322 + 0.8
178,324 + -0.7
178,335 + -0.2
178,341 + -1.4
178,347 + -0.1
178,358 - -1.9
178,381 - 12804 mRNA_4436 0.12 1.9
178,385 - 12804 mRNA_4436 0.12 -1.2
178,488 + 12804 mRNA_4436 0.29 0.5
178,622 - 12804 mRNA_4436 0.50 -0.7
178,627 + 12804 mRNA_4436 0.51 0.3
178,736 + 12804 mRNA_4436 0.68 1.0
178,820 + 12804 mRNA_4436 0.81 -1.7
178,867 + 12804 mRNA_4436 0.88 1.2
178,884 + 1.2
178,885 - -1.1