Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4276

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4275: 12643 - HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065, at 1774189 to 1777372 12643 mRNA_4276: 12644 - Hypothetical Protein, at 1777738 to 1779130 12644

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,776,740 - 12643 mRNA_4275 0.80 -0.3
1,776,886 - 12643 mRNA_4275 0.85 -1.1
1,776,897 + 12643 mRNA_4275 0.85 -0.6
1,776,978 - 12643 mRNA_4275 0.88 0.1
1,776,981 + 12643 mRNA_4275 0.88 0.9
1,777,133 + 1.1
1,777,270 - -0.7
1,777,290 + -1.4
1,777,293 - -0.9
1,777,298 + -0.3
1,777,393 + -0.9
1,777,427 + -0.8
1,777,454 + -0.6
1,777,463 + 0.2
1,777,871 - -2.0
1,777,892 + 12644 mRNA_4276 0.11 -1.0
1,777,895 - 12644 mRNA_4276 0.11 0.5
1,777,898 + 12644 mRNA_4276 0.11 -1.0
1,778,171 + 12644 mRNA_4276 0.31 0.6
1,778,335 + 12644 mRNA_4276 0.43 0.3
1,778,370 - 12644 mRNA_4276 0.45 0.5
1,778,482 + 12644 mRNA_4276 0.53 0.6
1,778,500 + 12644 mRNA_4276 0.55 -0.7
1,778,555 + 12644 mRNA_4276 0.59 -0.3
1,778,866 + 12644 mRNA_4276 0.81 0.4
1,779,035 + -0.8
1,779,097 - 0.9
1,779,175 + -2.6
1,779,470 - 0.2
1,779,774 + 0.4
1,779,907 - 0.0
1,779,936 - 0.7
1,779,936 - 0.7
1,779,947 + -0.9
1,779,951 - -1.2
1,779,952 - 0.0
1,779,952 - -1.2
1,779,954 - -0.2
1,779,960 + 0.9
1,779,961 + -2.5
1,779,965 - -0.2
1,779,970 - -0.1
1,780,065 - -0.8
1,780,089 - -1.6
1,780,117 + -0.1