Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4223

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1647878 to 1648825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1648878 to 1650600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1650679 to 1653904 12592

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,648,068 - 12590 mRNA_4222 0.20 -1.4
1,648,351 - 12590 mRNA_4222 0.50 -2.4
1,648,383 + 12590 mRNA_4222 0.53 -1.3
1,648,424 + 12590 mRNA_4222 0.58 -0.8
1,648,507 + 12590 mRNA_4222 0.66 -3.5
1,648,519 + 12590 mRNA_4222 0.68 -0.2
1,648,539 + 12590 mRNA_4222 0.70 -1.0
1,648,795 + -1.1
1,648,823 + 0.8
1,648,872 + -1.0
1,648,923 - 2.8
1,649,142 - 12591 mRNA_4223 0.15 1.1
1,649,400 + 12591 mRNA_4223 0.30 0.6
1,649,543 - 12591 mRNA_4223 0.39 -3.5
1,649,544 + 12591 mRNA_4223 0.39 0.8
1,649,601 + 12591 mRNA_4223 0.42 0.1
1,649,787 + 12591 mRNA_4223 0.53 0.5
1,649,791 + 12591 mRNA_4223 0.53 -1.5
1,650,033 + 12591 mRNA_4223 0.67 -1.3
1,650,152 + 12591 mRNA_4223 0.74 -1.8
1,650,152 - 12591 mRNA_4223 0.74 -2.6
1,650,161 + 12591 mRNA_4223 0.74 -0.2
1,650,173 - 12591 mRNA_4223 0.75 -1.6
1,650,182 + 12591 mRNA_4223 0.76 -1.5
1,650,224 - 12591 mRNA_4223 0.78 -1.6
1,650,358 + 12591 mRNA_4223 0.86 0.2
1,650,432 + 1.3
1,650,467 + -0.9
1,650,478 + -3.2
1,650,490 - 1.4
1,650,611 - 0.3
1,650,669 + -1.9
1,650,763 - 1.1
1,650,770 - -1.0
1,650,784 + -0.8
1,650,921 - -0.3
1,650,935 + 0.4
1,651,240 + 12592 mRNA_4224 0.17 -0.7
1,651,498 + 12592 mRNA_4224 0.25 1.4