Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4210

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1615699 to 1618403 12577 mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1618796 to 1621938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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1,618,011 - 12577 mRNA_4209 0.85 -1.6
1,618,038 + 12577 mRNA_4209 0.86 -0.5
1,618,202 - -0.6
1,618,241 + -0.0
1,618,254 - -1.2
1,618,255 + 1.2
1,618,448 - 0.4
1,618,470 + -0.2
1,618,528 + -0.5
1,618,601 - -1.9
1,618,757 - 0.9
1,619,150 - 12578 mRNA_4210 0.11 -0.9
1,619,391 + 12578 mRNA_4210 0.19 1.1
1,620,237 + 12578 mRNA_4210 0.46 1.2
1,620,265 + 12578 mRNA_4210 0.47 -3.8
1,620,546 - 12578 mRNA_4210 0.56 -2.3
1,620,570 - 12578 mRNA_4210 0.56 -0.4
1,620,659 + 12578 mRNA_4210 0.59 0.8
1,620,957 - 12578 mRNA_4210 0.69 -1.6
1,620,977 + 12578 mRNA_4210 0.69 -1.0
1,621,082 - 12578 mRNA_4210 0.73 -5.5
1,621,157 - 12578 mRNA_4210 0.75 -0.3
1,621,162 + 12578 mRNA_4210 0.75 -1.4
1,621,165 - 12578 mRNA_4210 0.75 -3.2
1,621,179 + 12578 mRNA_4210 0.76 -1.4
1,621,326 + 12578 mRNA_4210 0.80 -0.4
1,621,614 + 12578 mRNA_4210 0.90 -3.6
1,621,690 - -1.3
1,621,709 - -2.1
1,621,806 + -1.5
1,622,022 - 0.2
1,622,028 + -0.1
1,622,829 - 12579 mRNA_4211 0.67 -1.9
1,622,830 + 12579 mRNA_4211 0.68 -1.3