Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4021

Experiments: Sorted Low BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4020: 12388 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1175371 to 1177863 12388 mRNA_4021: 12389 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1178215 to 1180562 12389 mRNA_4022: 12390 - KOG2661 Peptidase family M48, at 1180594 to 1181890 12390

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
remove
1,177,672 - 0.0
1,177,680 + 0.6
1,177,835 - 0.0
1,177,951 + 0.6
1,178,042 + 0.3
1,178,083 + -0.6
1,178,110 + -0.6
1,178,112 + -0.5
1,178,115 - -0.3
1,178,119 - 0.2
1,178,126 + -0.5
1,178,138 + -0.6
1,178,260 - -2.0
1,178,291 + -0.4
1,178,441 + -2.4
1,178,454 + 12389 mRNA_4021 0.10 -1.8
1,178,462 - 12389 mRNA_4021 0.11 1.5
1,179,182 - 12389 mRNA_4021 0.41 0.7
1,179,182 - 12389 mRNA_4021 0.41 0.0
1,179,327 - 12389 mRNA_4021 0.47 -0.5
1,179,468 - 12389 mRNA_4021 0.53 -0.2
1,179,476 - 12389 mRNA_4021 0.54 -0.6
1,179,503 + 12389 mRNA_4021 0.55 -1.7
1,179,605 - 12389 mRNA_4021 0.59 -3.6
1,179,612 + 12389 mRNA_4021 0.59 -2.1
1,180,191 + 12389 mRNA_4021 0.84 0.2
1,180,778 - 12390 mRNA_4022 0.14 -1.0
1,180,806 + 12390 mRNA_4022 0.16 -1.1
1,180,835 + 12390 mRNA_4022 0.19 1.4