Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3920

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897887 to 899209 12287 mRNA_3920: 12288 - K12767 RIM15 serine/threonine-protein kinase RIM15, at 899540 to 908734 12288

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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899,255 + 0.0
899,289 + -1.8
899,293 + -0.1
899,400 + -4.0
899,426 + -0.8
900,000 + -2.4
900,153 - -2.0
900,160 - 0.7
900,311 - -3.3
900,562 + 12288 mRNA_3920 0.11 -2.8
900,763 - 12288 mRNA_3920 0.13 -3.8
901,485 + 12288 mRNA_3920 0.21 -0.1
901,496 + 12288 mRNA_3920 0.21 -2.7
901,909 + 12288 mRNA_3920 0.26 -0.9
902,151 - 12288 mRNA_3920 0.28 -2.0
902,538 - 12288 mRNA_3920 0.33 -4.2
902,580 + 12288 mRNA_3920 0.33 -2.2
902,666 - 12288 mRNA_3920 0.34 -0.9
903,121 + 12288 mRNA_3920 0.39 -2.6
903,256 - 12288 mRNA_3920 0.40 -2.3
903,537 + 12288 mRNA_3920 0.43 -4.7
903,573 + 12288 mRNA_3920 0.44 -4.6
903,694 - 12288 mRNA_3920 0.45 -1.9
903,819 - 12288 mRNA_3920 0.47 0.6
903,929 - 12288 mRNA_3920 0.48 -0.8
904,010 - 12288 mRNA_3920 0.49 0.0
904,076 - 12288 mRNA_3920 0.49 1.9
904,210 + 12288 mRNA_3920 0.51 0.7
904,250 + 12288 mRNA_3920 0.51 -1.1
904,305 - 12288 mRNA_3920 0.52 -2.9
904,781 + 12288 mRNA_3920 0.57 -1.6
904,941 + 12288 mRNA_3920 0.59 -3.2
905,028 + 12288 mRNA_3920 0.60 -1.5
905,061 - 12288 mRNA_3920 0.60 -2.1
905,076 - 12288 mRNA_3920 0.60 -1.2
905,106 + 12288 mRNA_3920 0.61 0.2
905,219 - 12288 mRNA_3920 0.62 1.1
905,346 + 12288 mRNA_3920 0.63 -3.7
905,385 - 12288 mRNA_3920 0.64 0.1
905,720 - 12288 mRNA_3920 0.67 -0.1
907,285 - 12288 mRNA_3920 0.84 -1.6
907,294 - 12288 mRNA_3920 0.84 -0.4
907,300 + 12288 mRNA_3920 0.84 0.3
907,779 + 12288 mRNA_3920 0.90 1.1
908,313 + -0.8
908,422 - -1.8
908,447 - -0.7
908,593 - -0.3
908,608 + -0.5
908,645 - -0.3
908,754 + 0.4
908,772 + -0.6
908,782 + -1.8
908,782 + -0.1
908,787 - -1.3
908,788 + -0.1
908,932 - -1.2
908,933 - 0.1
908,993 + 0.6
909,062 + 0.5
909,070 - -0.1
909,078 - -1.6
909,080 - 0.1
909,141 + -1.2
909,237 - -1.0
909,367 + -0.0
909,390 - 0.4
909,407 + 0.8
909,507 + -0.7
909,519 - -0.7
909,519 - 0.8
909,560 + 0.4
909,657 + -0.2