Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3895

Experiments: Sorted Low BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262 mRNA_3895: 12263 - Hypothetical Protein, at 844130 to 844681 12263 mRNA_3896: 12264 - BLAST F-box domain containing protein [Metarhizium maju..., at 844807 to 845932 12264

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted Low BODIPY Gate
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843,200 - 12262 mRNA_3894 0.66 0.2
843,417 - 12262 mRNA_3894 0.86 -2.7
843,474 + -2.1
843,479 - -1.6
843,481 + -1.7
843,481 + -2.2
843,606 - -0.6
843,621 - -0.5
843,623 - 0.3
843,627 + -0.2
843,647 - 0.4
843,723 - 1.3
843,747 - 0.3
843,757 - -0.3
843,908 - 0.6
843,941 + 0.3
844,047 - -0.3
844,055 - -0.7
844,056 + -0.4
844,071 + 0.0
844,143 + -0.1
844,198 + 12263 mRNA_3895 0.12 -2.2
844,332 - 12263 mRNA_3895 0.37 -0.8
844,340 + 12263 mRNA_3895 0.38 0.3
844,365 - 12263 mRNA_3895 0.43 -0.8
844,370 - 12263 mRNA_3895 0.43 0.2
844,371 + 12263 mRNA_3895 0.44 1.1
844,385 + 12263 mRNA_3895 0.46 -0.2
844,392 + 12263 mRNA_3895 0.47 0.7
844,410 - 12263 mRNA_3895 0.51 -1.0
844,423 - 12263 mRNA_3895 0.53 -2.4
844,543 + 12263 mRNA_3895 0.75 -1.8
844,665 - -0.4
844,671 - -0.9
844,678 + -0.9
844,699 + 0.1
844,708 + 0.1
844,709 + -1.3
844,711 - -0.8
844,713 + -1.8
845,136 - 12264 mRNA_3896 0.29 -1.4
845,300 - 12264 mRNA_3896 0.44 -1.7
845,431 + 12264 mRNA_3896 0.55 -1.6